RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 IGHV4-30-2A0A087WSY4 118 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 A0A096LNT2 108 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 LOC100506127A0A0U1RQW1 187 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 LOC390937A0A1W2PQ73 354 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 SC5DO75845 299 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 ISG15P05161 165 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 MAPK3P27361 379 aaPredicted RBP14.59□□□□□ -0.07
VIM-205ENST00000485947 ZNF121P58317 390 aaPredicted RBP14.59□□□□□ -0.07
VIM-205ENST00000485947 GALK2Q01415 458 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 SNTB2Q13425 540 aaKnown RBP14.59□□□□□ -0.07
VIM-205ENST00000485947 PRIMA1Q86XR5 153 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 ELMOD2Q8IZ81 293 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 ZNF525Q8N782 197 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 OR1J2Q8NGS2 313 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 SPATA3Q8NHX4 192 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 ABHD4Q8TB40 342 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 TXNL4BQ9NX01 149 aaKnown RBP14.59□□□□□ -0.07
VIM-205ENST00000485947 NBEAL1Q6ZS30 2694 aa14.59□□□□□ -0.07
VIM-205ENST00000485947 TRBV5-5A0A0J9YX44 114 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 F5H5K5 113 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 ANXA2P07355 339 aaKnown RBP14.58□□□□□ -0.08
VIM-205ENST00000485947 ACSM4P0C7M7 580 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 ACHEP22303 614 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 APLNRP35414 380 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 SLC6A9P48067 706 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 VBP1P61758 197 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 RPS11P62280 158 aaKnown RBP eCLIP14.58□□□□□ -0.08
VIM-205ENST00000485947 RSPO1Q2MKA7 263 aaPredicted RBP14.58□□□□□ -0.08
VIM-205ENST00000485947 ACSM3Q53FZ2 586 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 VHLLQ6RSH7 139 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 USP43Q70EL4 1123 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 PRSS45Q7RTY3 260 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 MYPOPQ86VE0 399 aaPredicted RBP14.58□□□□□ -0.08
VIM-205ENST00000485947 CPEB3Q8NE35 698 aaKnown RBP14.58□□□□□ -0.08
VIM-205ENST00000485947 GPR148Q8TDV2 347 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 MRPL24Q96A35 216 aaKnown RBP14.58□□□□□ -0.08
VIM-205ENST00000485947 PGAM5Q96HS1 289 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 SORCS2Q96PQ0 1159 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 PIMREGQ9BSJ6 248 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 CENPOQ9BU64 300 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 MS4A5Q9H3V2 200 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 SLC22A13Q9Y226 551 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 ARFGEF3Q5TH69 2177 aa14.58□□□□□ -0.08
VIM-205ENST00000485947 ABCA1O95477 2261 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 A0A0U1RQV5 110 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 KIAA1324LA8MWY0 1029 aaPredicted RBP14.57□□□□□ -0.08
VIM-205ENST00000485947 INAFM1C9JVW0 142 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 CRLF1O75462 422 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 TTRP02766 147 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 USF1P22415 310 aaPredicted RBP14.57□□□□□ -0.08
VIM-205ENST00000485947 STOMP27105 288 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 LSM3P62310 102 aaKnown RBP14.57□□□□□ -0.08
VIM-205ENST00000485947 Q499Y3 187 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 UNQ9370/PRO34162Q6UXP9 181 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 TMEM91Q6ZNR0 172 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 C1orf174Q8IYL3 243 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 CCDC54Q8NEL0 328 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 OR8B12Q8NGG6 310 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 OR52H1Q8NGJ2 320 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 RGP1Q92546 391 aaPredicted RBP14.57□□□□□ -0.08
VIM-205ENST00000485947 KCTD7Q96MP8 289 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 VRK1Q99986 396 aaPredicted RBP14.57□□□□□ -0.08
VIM-205ENST00000485947 BRD7Q9NPI1 651 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 ZNF391Q9UJN7 358 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 HHLA2Q9UM44 414 aa14.57□□□□□ -0.08
VIM-205ENST00000485947 FBN1P35555 2871 aaKnown RBP14.57□□□□□ -0.08
VIM-205ENST00000485947 VWC2LB2RUY7 222 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 ZNF879B4DU55 563 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 J3QW42 95 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 ARL6IP5O75915 188 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 DBHP09172 617 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 ZNF12P17014 697 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 APEX1P27695 318 aaKnown RBP14.56□□□□□ -0.08
VIM-205ENST00000485947 PCSK6P29122 969 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 NCS1P62166 190 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 TMEM249Q2WGJ8 235 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 CNPY1Q3B7I2 92 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 ZMAT1Q5H9K5 638 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 C22orf42Q6IC83 251 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 UNQ6126/PRO20091Q6UXV3 157 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 FAM57BQ71RH2 274 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 SLC7A6Q92536 515 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 MS4A3Q96HJ5 214 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 POM121L2Q96KW2 1035 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 C1QTNF5Q9BXJ0 243 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 OR10A2Q9H208 303 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 TMEM160Q9NX00 188 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 GPR160Q9UJ42 338 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 ZANQ9Y493 2812 aa14.56□□□□□ -0.08
VIM-205ENST00000485947 LOC100509620A0A075B734 347 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 A0A1B0GVI7 797 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 LOC107986453A0A1B0GWG9 222 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 UCHL1P09936 223 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 OCM2P0CE71 109 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 SLC2A1P11166 492 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 CCL1P22362 96 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 GIFP27352 417 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 RAD52P43351 418 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 NR4A2P43354 598 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 SELENOVP59797 346 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms