RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 CALB2P22676 271 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 OPRL1P41146 370 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 GMFBP60983 142 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 TEX36Q5VZQ5 186 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 PLBD1Q6P4A8 553 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 FIP1L1Q6UN15 594 aaKnown RBP17.83■□□□□ 0.44
USP40-215ENST00000484528 WDR82Q6UXN9 313 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 PDZD9Q8IXQ8 264 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 TIGD4Q8IY51 512 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 ADGRG5Q8IZF4 528 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 OR1M1Q8NGA1 313 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 LHX4Q969G2 390 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 CCL13Q99616 98 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 CHID1Q9BWS9 393 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 CHIAQ9BZP6 476 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 OR10A2Q9H208 303 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 PRDM13Q9H4Q3 707 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 ZNF696Q9H7X3 374 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 SP140LQ9H930 580 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 PRPF19Q9UMS4 504 aaKnown RBP17.83■□□□□ 0.44
USP40-215ENST00000484528 TRRAPQ9Y4A5 3859 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.82■□□□□ 0.44
USP40-215ENST00000484528 APOC1P02654 83 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 MELTFP08582 738 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 PAICSP22234 425 aaKnown RBP17.82■□□□□ 0.44
USP40-215ENST00000484528 GNALP38405 381 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 GINS1Q14691 196 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 WDR38Q5JTN6 314 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 Q6YL49 198 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 SHFQ7M4L6 423 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 FAM216BQ8N7L0 139 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 CCDC197Q8NCU1 140 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 OR52H1Q8NGJ2 320 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 GATAD2BQ8WXI9 593 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 RNPEPL1Q9HAU8 725 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 WNK1Q9H4A3 2382 aa17.82■□□□□ 0.44
USP40-215ENST00000484528 POM121CA8CG34 1229 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 PRR23D1E9PI22 279 aaPredicted RBP17.81■□□□□ 0.44
USP40-215ENST00000484528 PRR23D2P0DMB1 279 aaPredicted RBP17.81■□□□□ 0.44
USP40-215ENST00000484528 NAA10P41227 235 aaPredicted RBP17.81■□□□□ 0.44
USP40-215ENST00000484528 BPIFB3P59826 476 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 MICBQ29980 383 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 HS3ST5Q8IZT8 346 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 THEM6Q8WUY1 208 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 CANT1Q8WVQ1 401 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 THTPAQ9BU02 230 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 NOX4Q9NPH5 578 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 PDP1Q9P0J1 537 aaPredicted RBP17.81■□□□□ 0.44
USP40-215ENST00000484528 KLHDC2Q9Y2U9 406 aa17.81■□□□□ 0.44
USP40-215ENST00000484528 IGHV1-69DA0A0B4J2H0 117 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 GNGT2O14610 69 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 ACOT8O14734 319 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 CDIPTO14735 213 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 IGHV1-69P01742 117 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 LYNP07948 512 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 CFL1P23528 166 aaKnown RBP17.8■□□□□ 0.44
USP40-215ENST00000484528 RAG2P55895 527 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 SRSF4Q08170 494 aaKnown RBP17.8■□□□□ 0.44
USP40-215ENST00000484528 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.8■□□□□ 0.44
USP40-215ENST00000484528 ITPKCQ96DU7 683 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 MICU1Q9BPX6 476 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 ACOXLQ9NUZ1 547 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 ONECUT1Q9UBC0 465 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 KAAG1Q9UBP8 84 aa17.8■□□□□ 0.44
USP40-215ENST00000484528 RPUSD1Q9UJJ7 312 aaKnown RBP17.8■□□□□ 0.44
USP40-215ENST00000484528 ARRDC5A6NEK1 342 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 KCNAB3O43448 404 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 E2F6O75461 281 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 ECDO95905 644 aaPredicted RBP17.79■□□□□ 0.44
USP40-215ENST00000484528 TFF1P04155 84 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 CRYBA1P05813 215 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 SELLP14151 372 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 ACKR3P25106 362 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 PRB3Q04118 309 aaPredicted RBP17.79■□□□□ 0.44
USP40-215ENST00000484528 PRDX4Q13162 271 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 IKZF1Q13422 519 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 PDCD1Q15116 288 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 CPOQ8IVL8 374 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 KIR3DL3Q8N743 410 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 SCCPDHQ8NBX0 429 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 CSNK2A3Q8NEV1 391 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 BBS1Q8NFJ9 593 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 OR5T2Q8NGG2 359 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 OTOSQ8NHW6 89 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 RPL3LQ92901 407 aaKnown RBP17.79■□□□□ 0.44
USP40-215ENST00000484528 FAM71F1Q96KD3 344 aaPredicted RBP17.79■□□□□ 0.44
USP40-215ENST00000484528 SNTG1Q9NSN8 517 aa17.79■□□□□ 0.44
USP40-215ENST00000484528 A0A0U1RQK1 487 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 ANXA2P2A6NMY6 339 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 ZNF850A8MQ14 1090 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 TIPRLO75663 272 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 FAM107AO95990 144 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 MUC1P15941 1255 aaPredicted RBP17.78■□□□□ 0.44
USP40-215ENST00000484528 PRKACGP22612 351 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 RPS7P62081 194 aaKnown RBP17.78■□□□□ 0.44
USP40-215ENST00000484528 RELBQ01201 579 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 GK3PQ14409 553 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 VMO1Q7Z5L0 202 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 GALNT4Q8N4A0 578 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 LYZL4Q96KX0 146 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms