RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CCDC54Q8NEL0 328 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 OR4M1Q8NGD0 313 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 OR51A4Q8NGJ6 313 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ENKURQ8TC29 256 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 LGALS14Q8TCE9 139 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 SPTSSAQ969W0 71 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 RFT1Q96AA3 541 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 PGAM5Q96HS1 289 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 GMPPAQ96IJ6 420 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ZFP3Q96NJ6 502 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 KCNJ15Q99712 375 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 SOSTQ9BQB4 213 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF416Q9BWM5 594 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 PPP1R3EQ9H7J1 279 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 CRLF2Q9HC73 371 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 G6PC2Q9NQR9 355 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 FAM206AQ9NX38 181 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 PLEK2Q9NYT0 353 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 KCNN3Q9UGI6 736 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 STEAP1Q9UHE8 339 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 NUFIP1Q9UHK0 495 aaKnown RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ALPK2Q86TB3 2170 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 IGKV3D-15A0A087WSY6 115 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 A0A0G2JMP0 313 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 A0A0X1KG70 313 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 TMEM238LA0A1B0GVL6 79 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 LINC00854A0A1B0GVQ3 168 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 A0A1W2PR80 420 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 FUOMA2VDF0 154 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF724A8MTY0 619 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 SULT1B1O43704 296 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 LYZL6O75951 148 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 TPPPO94811 219 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 WNT11O96014 354 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 PLAUP00749 431 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 HLA-DQB1P01920 261 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 HNRNPCP07910 306 aaKnown RBP eCLIP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 CST2P09228 141 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 ACSM4P0C7M7 580 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 FCGR2AP12318 317 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 GNALP38405 381 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 SLC6A9P48067 706 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF121P58317 390 aaPredicted RBP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 MRPS10P82664 201 aaKnown RBP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 GALK2Q01415 458 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 MADCAM1Q13477 382 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 P2RY14Q15391 338 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 STK11Q15831 433 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 NRN1LQ496H8 165 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 ELFN2Q5R3F8 820 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 PHYHD1Q5SRE7 291 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 TFAP2EQ6VUC0 442 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 PGAP1Q75T13 922 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 DOK3Q7L591 496 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 ABHD12BQ7Z5M8 362 aaPredicted RBP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 WFDC8Q8IUA0 241 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 OR4M2Q8NGB6 313 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 OR5D14Q8NGL3 314 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 OR5H6Q8NGV6 325 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 OR6K3Q8NGY3 331 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 OR10AC1Q8NH08 325 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 ORAI1Q96D31 301 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 PIK3IP1Q96FE7 263 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 ALKBH3Q96Q83 286 aaPredicted RBP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 FOXB1Q99853 325 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 THAP7Q9BT49 309 aaPredicted RBP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 LINC00470Q9BZP3 86 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 SLCO5A1Q9H2Y9 848 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 PIGMQ9H3S5 423 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 PLEKHA1Q9HB21 404 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 DIABLOQ9NR28 239 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF275Q9NSD4 429 aaPredicted RBP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 DDX28Q9NUL7 540 aaKnown RBP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 TMEM38BQ9NVV0 291 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 TAS2R4Q9NYW5 299 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 UPB1Q9UBR1 384 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 MRPS7Q9Y2R9 242 aaKnown RBP6.02□□□□□ -1.44
BRCA1-216ENST00000484087 N6AMT1Q9Y5N5 214 aa6.02□□□□□ -1.44
BRCA1-216ENST00000484087 HIVEP1P15822 2718 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 TRAV8-7A0A075B6U6 113 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 FAM240BA0A1B0GVZ2 78 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 DEFB108AA8MXU0 73 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 ZNF587BE7ETH6 402 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 F5H5K5 113 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 SLC17A2O00624 439 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 CTDSPLO15194 276 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 MTRF1O75570 445 aaKnown RBP6.02□□□□□ -1.45
BRCA1-216ENST00000484087 TTRP02766 147 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 YES1P07947 543 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 IGFBP3P17936 291 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-216ENST00000484087 ADRA2CP18825 462 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 RAB3AP20336 220 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 CFPP27918 469 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 BDKRB2P30411 391 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 MAP2K3P46734 347 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 MMP15P51511 669 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 TPTEP56180 551 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 SORDQ00796 357 aa6.02□□□□□ -1.45
BRCA1-216ENST00000484087 ENDOGQ14249 297 aaKnown RBP6.02□□□□□ -1.45
BRCA1-216ENST00000484087 RAB35Q15286 201 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms