RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 RNFT2Q96EX2 444 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 PAPOLGQ9BWT3 736 aaKnown RBP15.11■□□□□ 0.01
HDAC6-225ENST00000483506 SHARPINQ9H0F6 387 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 PATZ1Q9HBE1 687 aaKnown RBP15.11■□□□□ 0.01
HDAC6-225ENST00000483506 TMEM165Q9HC07 324 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 EXOGQ9Y2C4 368 aaKnown RBP15.11■□□□□ 0.01
HDAC6-225ENST00000483506 SNX5Q9Y5X3 404 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 METTL15A6NJ78 407 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 PLPP2O43688 288 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 TTRP02766 147 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 FAM157CP0CG43 387 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 IRF2P14316 349 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 ATP6V1E1P36543 226 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 ACTC1P68032 377 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 ACTA1P68133 377 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 IL5RAQ01344 420 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 ZNF85Q03923 595 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 WDR86Q86TI4 376 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 GALNT4Q8N4A0 578 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 OR8S1Q8NH09 359 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 OR51E1Q8TCB6 317 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 Q96MT0 163 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 TBX5Q99593 518 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 BEX2Q9BXY8 128 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 TLNRD1Q9H1K6 362 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 GPR84Q9NQS5 396 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 UFSP2Q9NUQ7 469 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 HIF1ANQ9NWT6 349 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 UBAP1Q9NZ09 502 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 RNF7Q9UBF6 113 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 OR52A1Q9UKL2 312 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 POLR3KQ9Y2Y1 108 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-225ENST00000483506 CUBNO60494 3623 aa15.1■□□□□ 0.01
HDAC6-225ENST00000483506 PPIAL4EA0A075B759 164 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 ZNF816-ZNF321PA0A0X1KG74 233 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 CEACAM18A8MTB9 384 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 A8MXK9 166 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 ANKRD65E5RJM6 399 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PPIAL4DF5H284 164 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 CASQ2O14958 399 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PPIAL4FP0DN26 164 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PEX2P28328 305 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 GNALP38405 381 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 MAP2K3P46734 347 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 ZNF404Q494X3 552 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 BCL2L15Q5TBC7 163 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 LIPNQ5VXI9 398 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PLEKHG7Q6ZR37 379 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PRIMA1Q86XR5 153 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 C11orf53Q8IXP5 236 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 YIPF7Q8N8F6 280 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 OR1M1Q8NGA1 313 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 OR5P3Q8WZ94 311 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PPP1R14AQ96A00 147 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PPP1R3EQ9H7J1 279 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 AASSQ9UDR5 926 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PPIAL4AQ9Y536 164 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PCDHGB1Q9Y5G3 927 aa15.09■□□□□ 0.01
HDAC6-225ENST00000483506 PPIAL4CA0A0B4J2A2 164 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 ANXA2P2A6NMY6 339 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 DHRS7CA6NNS2 312 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 DHRS3O75911 302 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 LHBP01229 141 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 DBTP11182 482 aaKnown RBP15.08■□□□□ 0
HDAC6-225ENST00000483506 HNF1AP20823 631 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 CCL1P22362 96 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 ZNF91Q05481 1191 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 ZNF154Q13106 437 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 PRDX4Q13162 271 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 CDONQ4KMG0 1287 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 FAM76BQ5HYJ3 339 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 OGFRL1Q5TC84 451 aaPredicted RBP15.08■□□□□ 0
HDAC6-225ENST00000483506 LPCAT4Q643R3 524 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 CATSPERDQ86XM0 798 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 ZNF555Q8NEP9 628 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 SEMA6DQ8NFY4 1073 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 APH1BQ8WW43 257 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 HPSE2Q8WWQ2 592 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 RORBQ92753 470 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 RNF166Q96A37 237 aaPredicted RBP15.08■□□□□ 0
HDAC6-225ENST00000483506 LGALS12Q96DT0 336 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 MICU1Q9BPX6 476 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 TMEM246Q9BRR3 403 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 LPAR2Q9HBW0 351 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 MRPS18AQ9NVS2 196 aaKnown RBP15.08■□□□□ 0
HDAC6-225ENST00000483506 PCDHB10Q9UN67 800 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 WNK2Q9Y3S1 2297 aa15.08■□□□□ 0
HDAC6-225ENST00000483506 A0A1B0GTI1 187 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 TMEM210A6NLX4 147 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 ZNF850A8MQ14 1090 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 MTRF1O75570 445 aaKnown RBP15.07■□□□□ 0
HDAC6-225ENST00000483506 FOXH1O75593 365 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 GRPP07492 148 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 WNT2P09544 360 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 CFHR2P36980 270 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 RIPPLY1Q0D2K3 151 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 FAM201AQ5SY85 155 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 KCTD20Q7Z5Y7 419 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 EGFL6Q8IUX8 553 aa15.07■□□□□ 0
HDAC6-225ENST00000483506 ZDHHC23Q8IYP9 409 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms