RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 UBE2V2Q15819 145 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 ALKBH6Q3KRA9 238 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 MBNL2Q5VZF2 373 aaKnown RBP7.07□□□□□ -1.28
USP4-210ENST00000483212 FAM166AQ6J272 317 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 ALKBH2Q6NS38 261 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 TMEM108Q6UXF1 575 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 PGAP1Q75T13 922 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 C1orf174Q8IYL3 243 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 ACBD4Q8NC06 268 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 DNAAF1Q8NEP3 725 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 NUP37Q8NFH4 326 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 OR1M1Q8NGA1 313 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 OR5L1Q8NGL2 311 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 OR13C9Q8NGT0 318 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 KLF14Q8TD94 323 aaPredicted RBP7.07□□□□□ -1.28
USP4-210ENST00000483212 TMEM171Q8WVE6 324 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 PP6455Q8WZ26 134 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 PIGTQ969N2 578 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 HAVCR1Q96D42 359 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 CMBLQ96DG6 245 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 LRRC46Q96FV0 321 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 BCL2L14Q9BZR8 327 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 TPK1Q9H3S4 243 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 TCF7L1Q9HCS4 588 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 PIGLQ9Y2B2 252 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 AK6Q9Y3D8 172 aaKnown RBP7.07□□□□□ -1.28
USP4-210ENST00000483212 A3GALT2U3KPV4 340 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 FLNCQ14315 2725 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 FAM208BQ5VWN6 2430 aa7.07□□□□□ -1.28
USP4-210ENST00000483212 HCFC1P51610 2035 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 DOPEY1Q5JWR5 2465 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 USP9XQ93008 2570 aaPredicted RBP7.06□□□□□ -1.28
USP4-210ENST00000483212 IGLV3-9A0A075B6K5 115 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 A0A075B6Q4 140 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 ZNF816-ZNF321PA0A0X1KG74 233 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
USP4-210ENST00000483212 A0A1B0GWJ7 208 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 CLEC18AA5D8T8 446 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 IFITM5A6NNB3 132 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 DEFB108AA8MXU0 73 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 IQCF6A8MYZ5 107 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 SHISA9B4DS77 424 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 ABCD4O14678 606 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 PDCD5O14737 125 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 SULT1B1O43704 296 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 GMDSO60547 372 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 MAS1P04201 325 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 ALDOBP05062 364 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 SLC2A2P11168 524 aaPredicted RBP7.06□□□□□ -1.28
USP4-210ENST00000483212 ZNF250P15622 560 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 ATF1P18846 271 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 RAB3AP20336 220 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 KITLGP21583 273 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 RORCP51449 518 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 DGUOKQ16854 277 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 ZNF404Q494X3 552 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 C1orf100Q5SVJ3 147 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 CLVS2Q5SYC1 327 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 OR2T2Q6IF00 324 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 SFXN4Q6P4A7 337 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 CLEC18BQ6UXF7 455 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 NKAIN3Q8N8D7 197 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 CLEC18CQ8NCF0 446 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 CSNK2A3Q8NEV1 391 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 OR52N4Q8NGI2 321 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 OR5D14Q8NGL3 314 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 TBC1D15Q8TC07 691 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 HPSE2Q8WWQ2 592 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 SLC25A28Q96A46 364 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 TMEM204Q9BSN7 226 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 SLITRK2Q9H156 845 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 PLEKHA1Q9HB21 404 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 TMEM138Q9NPI0 162 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 GPR173Q9NS66 373 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 NDRG3Q9UGV2 375 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 GPR160Q9UJ42 338 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 PURGQ9UJV8 347 aaKnown RBP7.06□□□□□ -1.28
USP4-210ENST00000483212 V9GY05 133 aa7.06□□□□□ -1.28
USP4-210ENST00000483212 ANKHD1Q8IWZ3 2542 aaKnown RBP7.05□□□□□ -1.28
USP4-210ENST00000483212 MEGF11A6BM72 1044 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 GGT3PA6NGU5 568 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 TUBAL3A6NHL2 446 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 AIPO00170 330 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 SLC17A2O00624 439 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 CLPXO76031 633 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 AZGP1P25311 298 aaKnown RBP7.05□□□□□ -1.28
USP4-210ENST00000483212 BDKRB2P30411 391 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 GNALP38405 381 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 PPP3R1P63098 170 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 PRDX4Q13162 271 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 DYNC1I2Q13409 638 aaKnown RBP7.05□□□□□ -1.28
USP4-210ENST00000483212 LSAMPQ13449 338 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 BEX5Q5H9J7 111 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 RGS7BPQ6MZT1 257 aaPredicted RBP7.05□□□□□ -1.28
USP4-210ENST00000483212 UNQ6126/PRO20091Q6UXV3 157 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 Q6ZR03 302 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 LRP11Q86VZ4 500 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 CROCCP3Q8IVE0 287 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 CDH26Q8IXH8 852 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 LILRB1Q8NHL6 650 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms