RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PCK2Q16822 640 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 RFX4Q33E94 735 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 FGD3Q5JSP0 725 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 WDR38Q5JTN6 314 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 SMARCD3Q6STE5 483 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 SLC36A1Q7Z2H8 476 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 C11orf53Q8IXP5 236 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 SLC15A3Q8IY34 581 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 OR8H2Q8N162 312 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 LYG1Q8N1E2 194 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 FAM216BQ8N7L0 139 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 Q8N7P7 452 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 OR5T2Q8NGG2 359 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 OR56B2PQ8NGI1 322 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 LRRC29Q8WV35 223 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 CFHR4Q92496 578 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 SGCDQ92629 289 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 TNFRSF14Q92956 283 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 PPP1R14AQ96A00 147 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 OSBPL10Q9BXB5 764 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 FN3KQ9H479 309 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 TOR3AQ9H497 397 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 C14orf119Q9NWQ9 140 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 MRPL22Q9NWU5 206 aaKnown RBP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 PRPF19Q9UMS4 504 aaKnown RBP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 FAM32AQ9Y421 112 aaKnown RBP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 TRBV4-1A0A0J9YWV2 114 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 OR6C68A6NDL8 312 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 ANKRD30BLA7E2S9 258 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 H3BUX3 64 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-206ENST00000483030 ACOT8O14734 319 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 CASQ2O14958 399 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-206ENST00000483030 ARPC3O15145 178 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 FBXO24O75426 580 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 DIRAS1O95057 198 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 RPSAP08865 295 aaKnown RBP6.03□□□□□ -1.44
CSDE1-206ENST00000483030 VSIG10L2P0DP72 767 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 SLC2A1P11166 492 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 SELLP14151 372 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 AMY2BP19961 511 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 NOS3P29474 1203 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 SLC6A6P31641 620 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 PYCR1P32322 319 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 GRK5P34947 590 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 TGM4P49221 684 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 PSMD7P51665 324 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 PRKXP51817 358 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 UBE2E1P51965 193 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 GMFBP60983 142 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 CSNK2BP67870 215 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 MAPRE2Q15555 327 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 NSUN5P1Q3KNT7 163 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 LRRC10Q5BKY1 277 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 SLC35F1Q5T1Q4 408 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 DRAM2Q6UX65 266 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 DPY19L4Q7Z388 723 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 WDR86Q86TI4 376 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 ZBTB46Q86UZ6 589 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 KLHDC1Q8N7A1 406 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 BEND2Q8NDZ0 799 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 OR4C13Q8NGP0 309 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 OR9Q1Q8NGQ5 310 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 OR8S1Q8NH09 359 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 OR52J3Q8NH60 311 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 H1FXQ92522 213 aaKnown RBP6.03□□□□□ -1.44
CSDE1-206ENST00000483030 RORBQ92753 470 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 SSX3Q99909 188 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 SIKE1Q9BRV8 207 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 DCTN5Q9BTE1 182 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 IFT27Q9BW83 186 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 FAM234AQ9H0X4 552 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 RNPEPL1Q9HAU8 725 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 SAR1AQ9NR31 198 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 SNTG1Q9NSN8 517 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 CENPMQ9NSP4 180 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 NECAP2Q9NVZ3 263 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 NDUFAF4Q9P032 175 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 AP3M1Q9Y2T2 418 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 MAB21L2Q9Y586 359 aa6.03□□□□□ -1.44
CSDE1-206ENST00000483030 NOTCH3Q9UM47 2321 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 TVP23AA6NH52 213 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 CDIPTO14735 213 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 XPNPEP2O43895 674 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 TFF1P04155 84 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 NCK1P16333 377 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 RHCEP18577 417 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 PAX6P26367 422 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 POU1F1P28069 291 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 OTX1P32242 354 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-206ENST00000483030 DDOSTP39656 456 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 NAA10P41227 235 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-206ENST00000483030 EMX1Q04741 257 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-206ENST00000483030 ACSM1Q08AH1 577 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 TAF13Q15543 124 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 TM4SF20Q53R12 229 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 ANKRD39Q53RE8 183 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 VAX1Q5SQQ9 334 aa6.02□□□□□ -1.45
CSDE1-206ENST00000483030 ATPAF1Q5TC12 328 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-206ENST00000483030 NCR3LG1Q68D85 454 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms