RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 MSL2Q9HCI7 577 aa10.45□□□□□ -0.74
SDC1-206ENST00000482879 DYNLRB1Q9NP97 96 aa10.45□□□□□ -0.74
SDC1-206ENST00000482879 CYSLTR2Q9NS75 346 aa10.45□□□□□ -0.74
SDC1-206ENST00000482879 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
SDC1-206ENST00000482879 ENPP5Q9UJA9 477 aa10.45□□□□□ -0.74
SDC1-206ENST00000482879 LAMP3Q9UQV4 416 aa10.45□□□□□ -0.74
SDC1-206ENST00000482879 CRYBG3Q68DQ2 2970 aa10.45□□□□□ -0.74
SDC1-206ENST00000482879 DCHS2Q6V1P9 2916 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 HECTD1Q9ULT8 2610 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 ARID1AO14497 2285 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 A0A1W2PPK0 400 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 ZNF850A8MQ14 1090 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 ZNF879B4DU55 563 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 M0R233 179 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 RGS9O75916 674 aaPredicted RBP10.44□□□□□ -0.74
SDC1-206ENST00000482879 CST4P01036 141 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 CD8AP01732 235 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 HLA-DPB1P04440 258 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 NAT2P11245 290 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 CA6P23280 308 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 GNALP38405 381 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 ZNF81P51508 661 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 MMP15P51511 669 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 SNRPD2P62316 118 aaKnown RBP10.44□□□□□ -0.74
SDC1-206ENST00000482879 FABP5Q01469 135 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 INSL4Q14641 139 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 CLVS2Q5SYC1 327 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 UNQ9370/PRO34162Q6UXP9 181 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 TMEM91Q6ZNR0 172 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 C20orf204Q6ZNR8 217 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 Q6ZR03 302 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 MOB3CQ70IA8 216 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 DTX2Q86UW9 622 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 OR13F1Q8NGS4 319 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 PIGTQ969N2 578 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 TMEM106AQ96A25 262 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 YIPF6Q96EC8 236 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 OR14A2Q96R54 314 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 TRAF4Q9BUZ4 470 aaPredicted RBP10.44□□□□□ -0.74
SDC1-206ENST00000482879 SLC22A4Q9H015 551 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 CGGBP1Q9UFW8 167 aaPredicted RBP10.44□□□□□ -0.74
SDC1-206ENST00000482879 PMF1-BGLAPU3KQ54 211 aa10.44□□□□□ -0.74
SDC1-206ENST00000482879 TRBV5-7A0A0A0MS05 114 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 ZSCAN5BA6NJL1 495 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 H0YL77 283 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 GABRPO00591 440 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 SPRY3O43610 288 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 GMDSO60547 372 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 GATBO75879 557 aaKnown RBP10.43□□□□□ -0.74
SDC1-206ENST00000482879 NRASP01111 189 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 BMP4P12644 408 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 PRF1P14222 555 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 GADD45AP24522 165 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 MAPK3P27361 379 aaPredicted RBP10.43□□□□□ -0.74
SDC1-206ENST00000482879 TGFBR2P37173 567 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 CRYBB2P43320 205 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 PRDX4Q13162 271 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 OR8G1Q15617 311 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 ZMAT1Q5H9K5 638 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 TMEM42Q69YG0 159 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 C11orf71Q6IPW1 123 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 KRT74Q7RTS7 529 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 GPR141Q7Z602 305 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 SERPINA12Q8IW75 414 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 PARP16Q8N5Y8 322 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 OR2Z1Q8NG97 314 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 OR5D14Q8NGL3 314 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 PP6455Q8WZ26 134 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 THRSPQ92748 146 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 DERL3Q96Q80 235 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 HIST1H2AAQ96QV6 131 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 MS4A5Q9H3V2 200 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 ZCCHC4Q9H5U6 513 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 PPP1R3EQ9H7J1 279 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 EXOSC4Q9NPD3 245 aaKnown RBP10.43□□□□□ -0.74
SDC1-206ENST00000482879 NOX4Q9NPH5 578 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 GPR173Q9NS66 373 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 FBXO9Q9UK97 447 aaPredicted RBP10.43□□□□□ -0.74
SDC1-206ENST00000482879 STUB1Q9UNE7 303 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 SSR3Q9UNL2 185 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 MPC1Q9Y5U8 109 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 ABCA12Q86UK0 2595 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 LRBAP50851 2863 aa10.43□□□□□ -0.74
SDC1-206ENST00000482879 TRDV1A0A1B0GX56 115 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 ANKRD61A6NGH8 418 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 ANXA2P2A6NMY6 339 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 C17orf100A8MU93 164 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 GPX5O75715 221 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 SC5DO75845 299 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 RAF1P04049 648 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 KRTAP10-9P60411 292 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 DMRTC1Q5HYR2 192 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 CEP78Q5JTW2 689 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 FAM27D1Q5T7N8 215 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 PLCXD3Q63HM9 321 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 CD200R1LQ6Q8B3 271 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 PAMR1Q6UXH9 720 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 UTS2BQ765I0 119 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 ZDHHC23Q8IYP9 409 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 ZCCHC24Q8N2G6 241 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms