RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ZNF440Q8IYI8 595 aa12.69□□□□□ -0.38
COL9A2-207ENST00000482722 OR2I1PQ8NGU4 316 aa12.69□□□□□ -0.38
COL9A2-207ENST00000482722 ABHD6Q9BV23 337 aa12.69□□□□□ -0.38
COL9A2-207ENST00000482722 C5orf66Q9H5L9 145 aa12.69□□□□□ -0.38
COL9A2-207ENST00000482722 GSKIPQ9P0R6 139 aa12.69□□□□□ -0.38
COL9A2-207ENST00000482722 COLQQ9Y215 455 aaPredicted RBP12.69□□□□□ -0.38
COL9A2-207ENST00000482722 AMDHD2Q9Y303 409 aa12.69□□□□□ -0.38
COL9A2-207ENST00000482722 TTC28Q96AY4 2481 aa12.69□□□□□ -0.38
COL9A2-207ENST00000482722 IGHV5-51A0A0C4DH38 117 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 IFNA2P01563 188 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 CLPSP04118 112 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 FSTP19883 344 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 ZNF117Q03924 483 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 ANKRD55Q3KP44 614 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 SLC18B1Q6NT16 456 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 LINC00346Q8IVM7 164 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 MALSU1Q96EH3 234 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 MARS2Q96GW9 593 aaKnown RBP12.68□□□□□ -0.38
COL9A2-207ENST00000482722 MESP1Q9BRJ9 268 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 RAB18Q9NP72 206 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 FLVCR1Q9Y5Y0 555 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
COL9A2-207ENST00000482722 RTTNQ86VV8 2226 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 ITGA3P26006 1051 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 CD38P28907 300 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 P2RY4P51582 365 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 EIF5AP63241 154 aaKnown RBP12.68□□□□□ -0.38
COL9A2-207ENST00000482722 INSM1Q01101 510 aaPredicted RBP12.68□□□□□ -0.38
COL9A2-207ENST00000482722 UNC119Q13432 240 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 SMAD4Q13485 552 aaKnown RBP12.68□□□□□ -0.38
COL9A2-207ENST00000482722 ACKR1Q16570 336 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 C1orf100Q5SVJ3 147 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 TMEM268Q5VZI3 342 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 OR2A2Q6IF42 318 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 CATSPERDQ86XM0 798 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 ANGPTL5Q86XS5 388 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 OR4K15Q8NH41 348 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 PTPMT1Q8WUK0 201 aaPredicted RBP12.68□□□□□ -0.38
COL9A2-207ENST00000482722 GTF3AQ92664 365 aaKnown RBP12.68□□□□□ -0.38
COL9A2-207ENST00000482722 SLAMF9Q96A28 289 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 SPACA5Q96QH8 159 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 METTL8Q9H825 291 aaKnown RBP12.68□□□□□ -0.38
COL9A2-207ENST00000482722 CNTD2Q9H8S5 307 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 RAB22AQ9UL26 194 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 RHBDD3Q9Y3P4 386 aa12.68□□□□□ -0.38
COL9A2-207ENST00000482722 SFT2D2O95562 160 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 IFI6P09912 130 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 RIDAP52758 137 aaKnown RBP12.67□□□□□ -0.38
COL9A2-207ENST00000482722 HSD17B7P56937 341 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 SLC37A1P57057 533 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 IGLV3-21P80748 117 aaPredicted RBP12.67□□□□□ -0.38
COL9A2-207ENST00000482722 CLINT1Q14677 625 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 ZNF239Q16600 458 aaKnown RBP12.67□□□□□ -0.38
COL9A2-207ENST00000482722 OR10H5Q8NGA6 315 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 TCTN2Q96GX1 697 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 C14orf144Q96I85 54 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 UFSP2Q9NUQ7 469 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 CEP192Q8TEP8 1941 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 LOC107986453A0A1B0GWG9 222 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 MEGF11A6BM72 1044 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 P2RY10O00398 339 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 TSPAN15O95858 294 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 HOXB5P09067 269 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 HKR1P10072 659 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 HOXA5P20719 270 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 IL12BP29460 328 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 GNALP38405 381 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 DMRTC1Q5HYR2 192 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 EMC4Q5J8M3 183 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 NSUN5P2Q63ZY6 315 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 DMRTC2Q8IXT2 367 aaPredicted RBP12.67□□□□□ -0.38
COL9A2-207ENST00000482722 TERB2Q8NHR7 220 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 PTX4Q96A99 478 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 SLC26A1Q9H2B4 701 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 DNAJB11Q9UBS4 358 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 STARD10Q9Y365 291 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 NME2P1O60361 137 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 IFNA17P01571 189 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 SUPT4H1P63272 117 aaKnown RBP12.67□□□□□ -0.38
COL9A2-207ENST00000482722 KIAA0141Q14154 515 aaPredicted RBP12.67□□□□□ -0.38
COL9A2-207ENST00000482722 GUK1Q16774 197 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 MIDNQ504T8 468 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 SDK2Q58EX2 2172 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 FNDC7Q5VTL7 733 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 ZNF565Q8N9K5 539 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 POC1AQ8NBT0 407 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 SLC25A43Q8WUT9 341 aaPredicted RBP12.67□□□□□ -0.38
COL9A2-207ENST00000482722 LIPHQ8WWY8 451 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 SCRT1Q9BWW7 348 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 OPA3Q9H6K4 179 aa12.67□□□□□ -0.38
COL9A2-207ENST00000482722 KNTC1P50748 2209 aa12.66□□□□□ -0.38
COL9A2-207ENST00000482722 PRSS37A4D1T9 235 aa12.66□□□□□ -0.38
COL9A2-207ENST00000482722 IL33O95760 270 aa12.66□□□□□ -0.38
COL9A2-207ENST00000482722 CAPZBP47756 277 aa12.66□□□□□ -0.38
COL9A2-207ENST00000482722 RNF144BQ7Z419 303 aa12.66□□□□□ -0.38
COL9A2-207ENST00000482722 LYPD6Q86Y78 171 aa12.66□□□□□ -0.38
COL9A2-207ENST00000482722 ARRDC1Q8N5I2 433 aa12.66□□□□□ -0.38
COL9A2-207ENST00000482722 LYPD6BQ8NI32 183 aa12.66□□□□□ -0.38
COL9A2-207ENST00000482722 C2orf50Q96LR7 162 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms