RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 SLC2A5P22732 501 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 ACKR3P25106 362 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 PSMA6P60900 246 aaKnown RBP8.7□□□□□ -1.02
CPSF4-212ENST00000482251 SNAPC1Q16533 368 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 AWAT1Q58HT5 328 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 DMRTC1Q5HYR2 192 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 KCTD8Q6ZWB6 473 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 BCDIN3DQ7Z5W3 292 aaKnown RBP8.7□□□□□ -1.02
CPSF4-212ENST00000482251 COMMD2Q86X83 199 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 OR1M1Q8NGA1 313 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 OR8B12Q8NGG6 310 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 OR52H1Q8NGJ2 320 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 ST8SIA4Q92187 359 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 LYZL4Q96KX0 146 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 CADM1Q9BY67 442 aaKnown RBP8.7□□□□□ -1.02
CPSF4-212ENST00000482251 SLC25A19Q9HC21 320 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 PAPOLBQ9NRJ5 636 aaKnown RBP8.7□□□□□ -1.02
CPSF4-212ENST00000482251 FAM53CQ9NYF3 392 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 ERVK-18Q9QC07 812 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 LAMP5Q9UJQ1 280 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 LRP12Q9Y561 859 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 DOCK11Q5JSL3 2073 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 KIR2DS1A0A191URI9 304 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 CCDC182A6NF36 153 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 ZNF850A8MQ14 1090 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 PRR32B1ATL7 298 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 MITFO75030 526 aaPredicted RBP8.69□□□□□ -1.02
CPSF4-212ENST00000482251 PLATP00750 562 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 APOC1P02654 83 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 DDOSTP39656 456 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 DAPP51397 102 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 MZT1Q08AG7 82 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 PRDX4Q13162 271 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 KCNJ8Q15842 424 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 WDR82Q6UXN9 313 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 KRT77Q7Z794 578 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 PDZD9Q8IXQ8 264 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 FAM216BQ8N7L0 139 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 ZNF454Q8N9F8 522 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 SPERTQ8NA61 448 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 PLPP7Q8NBV4 271 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 RPL3LQ92901 407 aaKnown RBP8.69□□□□□ -1.02
CPSF4-212ENST00000482251 CCL13Q99616 98 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 TEX12Q9BXU0 123 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 FGF23Q9GZV9 251 aaPredicted RBP8.69□□□□□ -1.02
CPSF4-212ENST00000482251 SP140LQ9H930 580 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 SNTG1Q9NSN8 517 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 COPS3Q9UNS2 423 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 TENM1Q9UKZ4 2725 aa8.69□□□□□ -1.02
CPSF4-212ENST00000482251 ANXA2P2A6NMY6 339 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 DVL1O14640 695 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 CDIPTO14735 213 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 GSC2O15499 205 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 HOXA3O43365 443 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-212ENST00000482251 PRKYO43930 277 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 TOX4O94842 621 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 SELLP14151 372 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 CFL1P23528 166 aaKnown RBP8.68□□□□□ -1.02
CPSF4-212ENST00000482251 CPT2P23786 658 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 PRTN3P24158 256 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 CFHR2P36980 270 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 COMPP49747 757 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-212ENST00000482251 NPY4RP50391 375 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 CRISP1P54107 249 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 PRB3Q04118 309 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-212ENST00000482251 MFGE8Q08431 387 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-212ENST00000482251 IKZF1Q13422 519 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 SLC9A3R2Q15599 337 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 DEFB112Q30KQ8 113 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 WDR38Q5JTN6 314 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 SLC35D3Q5M8T2 416 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 GPR157Q5UAW9 335 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 LCN1P1Q5VSP4 162 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 TEX36Q5VZQ5 186 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 FAHD1Q6P587 224 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 BTN2A1Q7KYR7 527 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 C11orf53Q8IXP5 236 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 PAPD5Q8NDF8 572 aaKnown RBP8.68□□□□□ -1.02
CPSF4-212ENST00000482251 CSNK2A3Q8NEV1 391 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 OR5T2Q8NGG2 359 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 FAM81AQ8TBF8 368 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 HPSE2Q8WWQ2 592 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 PIGCQ92535 297 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 TBX15Q96SF7 602 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 PKP2Q99959 881 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 MICU1Q9BPX6 476 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 RTL8AQ9BWD3 113 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 RGCCQ9H4X1 137 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 NIPAL2Q9H841 368 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 KRT84Q9NSB2 600 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 DNAJB11Q9UBS4 358 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 IKZF2Q9UKS7 526 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 GTF2A1LQ9UNN4 478 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 PCDHGB1Q9Y5G3 927 aa8.68□□□□□ -1.02
CPSF4-212ENST00000482251 ZNF879B4DU55 563 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-212ENST00000482251 TNFRSF13BO14836 293 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-212ENST00000482251 MAGEB4O15481 346 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-212ENST00000482251 LHBP01229 141 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms