RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZBED5Q49AG3 693 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 ZNF585BQ52M93 769 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 CYBRD1Q53TN4 286 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 TECRLQ5HYJ1 363 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 SPANXN4Q5MJ08 99 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 DCAF10Q5QP82 559 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 FBXW9Q5XUX1 488 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 TMEM215Q68D42 235 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 UHRF1BP1Q6BDS2 1440 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 OR52E8Q6IFG1 317 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 FAM71E1Q6IPT2 247 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 WDR74Q6RFH5 385 aaPredicted RBP3.4□□□□□ -1.87
VPS41-212ENST00000482217 Q6ZVQ6 151 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 MTURNQ8N3F0 131 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 TCEANCQ8N8B7 351 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 OR2M7Q8NG81 312 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 OR4F15Q8NGB8 312 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 OR1J1Q8NGS3 322 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 OR6N1Q8NGY5 312 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 SPPL2BQ8TCT7 592 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 MAPK15Q8TD08 544 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 TNFAIP8L1Q8WVP5 186 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 L3HYPDHQ96EM0 354 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 DNAJA3Q96EY1 480 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 CMTM7Q96FZ5 175 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 VAT1Q99536 393 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 FAM173AQ9BQD7 235 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 EBF2Q9HAK2 575 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 SIAEQ9HAT2 523 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 MEPEQ9NQ76 525 aaPredicted RBP3.4□□□□□ -1.87
VPS41-212ENST00000482217 FBXO6Q9NRD1 293 aaPredicted RBP3.4□□□□□ -1.87
VPS41-212ENST00000482217 OR1A1Q9P1Q5 309 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 WRAP73Q9P2S5 460 aaPredicted RBP3.4□□□□□ -1.87
VPS41-212ENST00000482217 WDR97A6NE52 1622 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 COL22A1Q8NFW1 1626 aaPredicted RBP3.4□□□□□ -1.87
VPS41-212ENST00000482217 RIMS1Q86UR5 1692 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 TMEM131Q92545 1883 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 VWA8A3KMH1 1905 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 SOGA1O94964 1423 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 PQLC2LA1A4F0 135 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 C9orf170A2RU37 121 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 PRORSD1PA6NEY8 169 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 ZNF587BE7ETH6 402 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 MFNGO00587 321 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 BHLHE40O14503 412 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 MRPS12O15235 138 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 PLIN3O60664 434 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 WDR1O75083 606 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 POP7O75817 140 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 SLC22A5O76082 557 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 PPP1R3DO95685 299 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 IFNA1P01562 189 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 IGHV2-5P01817 119 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 SERPINA7P05543 415 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 C1GALT1C1LP0DN25 315 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 IGHV4-31P0DP07 118 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 HOXB6P17509 224 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 GM2AP17900 193 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 RPL35AP18077 110 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 F8A1P23610 371 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 F2RP25116 425 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 HTR1EP28566 365 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 S100GP29377 79 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 ERP29P30040 261 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 CEACAM8P31997 349 aaPredicted RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 YAP1P46937 504 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 GCLMP48507 274 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 SULT1A1P50225 295 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 SULT1A2P50226 295 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 ZNF133P52736 654 aaPredicted RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 CDKN2DP55273 166 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 DNAJB13P59910 316 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 PFN3P60673 137 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 CDC42P60953 191 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 RPS18P62269 152 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 ARG2P78540 354 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 RUNX1Q01196 453 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 FMODQ06828 376 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 KCNJ11Q14654 390 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 SURF2Q15527 256 aaPredicted RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 WHAMMP3Q1A5X7 153 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 UNC50Q53HI1 259 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 GPRC6AQ5T6X5 926 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 C1orf189Q5VU69 101 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 HBMQ6B0K9 141 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 LPCAT3Q6P1A2 487 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 GFRALQ6UXV0 394 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 BAIAP2L2Q6UXY1 529 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 GRINAQ7Z429 371 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 RBM23Q86U06 439 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 COMMD7Q86VX2 200 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 ANGPTL5Q86XS5 388 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 TMEM219Q86XT9 240 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 C10orf107Q8IVU9 208 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 PIANPQ8IYJ0 282 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 PRR22Q8IZ63 422 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 GATD1Q8NB37 220 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 SMRP1Q8NCR6 262 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 OR8G5Q8NG78 346 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms