RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 OR51V1Q9H2C8 321 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 PRDM13Q9H4Q3 707 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 POMPQ9Y244 141 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 MEGF8Q7Z7M0 2845 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 IGHV1-69DA0A0B4J2H0 117 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 hCG_38984A0A1B0GV85 526 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 FCN3O75636 299 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 KNG1P01042 644 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 LHBP01229 141 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 IGHV1-69P01742 117 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 APOC1P02654 83 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 H2BFMP0C1H6 154 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 POU1F1P28069 291 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 GSK3AP49840 483 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 RAG2P55895 527 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 GMFBP60983 142 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 ELF3P78545 371 aaPredicted RBP12.61□□□□□ -0.39
LIMS3-203ENST00000480744 PDCD1Q15116 288 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 MICBQ29980 383 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 TEX36Q5VZQ5 186 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 TREML4Q6UXN2 200 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 SHFQ7M4L6 423 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 FGFRL1Q8N441 504 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 KIR3DL3Q8N743 410 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 OR1M1Q8NGA1 313 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 OR52H1Q8NGJ2 320 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 OR4F5Q8NH21 305 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 GIPC3Q8TF64 312 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 RNF133Q8WVZ7 376 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 AMELYQ99218 206 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 FEVQ99581 238 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 CCL13Q99616 98 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 SLITRK2Q9H156 845 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 PPP1R3EQ9H7J1 279 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 RNPEPL1Q9HAU8 725 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 BEX1Q9HBH7 125 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 ACOXLQ9NUZ1 547 aa12.61□□□□□ -0.39
LIMS3-203ENST00000480744 A0A1B0GW55 424 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 KCNAB3O43448 404 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 GLCEO94923 617 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 ECDO95905 644 aaPredicted RBP12.6□□□□□ -0.39
LIMS3-203ENST00000480744 DUX4L2P0CJ85 424 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 DUX4L3P0CJ86 424 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 DUX4L4P0CJ87 422 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 DUX4L5P0CJ88 424 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 DUX4L6P0CJ89 424 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 DUX4L7P0CJ90 424 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 PAICSP22234 425 aaKnown RBP12.6□□□□□ -0.39
LIMS3-203ENST00000480744 CFL1P23528 166 aaKnown RBP12.6□□□□□ -0.39
LIMS3-203ENST00000480744 NAA10P41227 235 aaPredicted RBP12.6□□□□□ -0.39
LIMS3-203ENST00000480744 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 DUX4L9Q6RFH8 374 aaPredicted RBP12.6□□□□□ -0.39
LIMS3-203ENST00000480744 WDR82Q6UXN9 313 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 C17orf107Q6ZR85 190 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.6□□□□□ -0.39
LIMS3-203ENST00000480744 FAM216BQ8N7L0 139 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 CSNK2A3Q8NEV1 391 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 SEH1LQ96EE3 360 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 ZNF319Q9P2F9 582 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 ONECUT1Q9UBC0 465 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 KAAG1Q9UBP8 84 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 DUX4Q9UBX2 424 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
LIMS3-203ENST00000480744 RHBDD3Q9Y3P4 386 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 MMP24Q9Y5R2 645 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 TRRAPQ9Y4A5 3859 aa12.6□□□□□ -0.39
LIMS3-203ENST00000480744 A0A0U1RQK1 487 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 ANXA2P2A6NMY6 339 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 GNGT2O14610 69 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 CDIPTO14735 213 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 TIPRLO75663 272 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 CST1P01037 141 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 RAP2AP10114 183 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 MUC1P15941 1255 aaPredicted RBP12.59□□□□□ -0.39
LIMS3-203ENST00000480744 OPRL1P41146 370 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 SRSF4Q08170 494 aaKnown RBP12.59□□□□□ -0.39
LIMS3-203ENST00000480744 IKZF1Q13422 519 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 FLOT2Q14254 428 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 KLHL12Q53G59 568 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 PLBD1Q6P4A8 553 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 CD300LDQ6UXZ3 194 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 ASRGL1Q7L266 308 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 PRSS45Q7RTY3 260 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 SLC36A1Q7Z2H8 476 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 VMO1Q7Z5L0 202 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 TIGD4Q8IY51 512 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 TMEM86BQ8N661 226 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 TBC1D15Q8TC07 691 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 THEM6Q8WUY1 208 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 CANT1Q8WVQ1 401 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 SSMEM1Q8WWF3 244 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 UTP4Q969X6 686 aaKnown RBP12.59□□□□□ -0.39
LIMS3-203ENST00000480744 MICU1Q9BPX6 476 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 CNTD2Q9H8S5 307 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 C1RLQ9NZP8 487 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 POMT1Q9Y6A1 747 aa12.59□□□□□ -0.39
LIMS3-203ENST00000480744 A0A1B0GUS0 222 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 TCRBV3S1A0A5B6 114 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 AQP12BA6NM10 295 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms