RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	DOCK11	Q5JSL3	2073 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	LOC100509620	A0A075B734	347 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	C17orf100	A8MU93	164 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	CLDN25	C9JDP6	229 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894		F5H5K5	113 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894		M0R135	149 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	NAT2	P11245	290 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	CFL1	P23528	166 aa	Known RBP	13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	MAGEB1	P43366	347 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	SLC6A9	P48067	706 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	SRSF4	Q08170	494 aa	Known RBP	13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	PCGF3	Q3KNV8	242 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	BRICD5	Q6PL45	260 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	LRP11	Q86VZ4	500 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF283	Q8N7M2	679 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	OR4F5	Q8NH21	305 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF799	Q96GE5	643 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	TIMD4	Q96H15	378 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	RGCC	Q9H4X1	137 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	OPA3	Q9H6K4	179 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	AMBN	Q9NP70	447 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	PNRC2	Q9NPJ4	139 aa	Known RBP	13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	PSORS1C1	Q9UIG5	152 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF391	Q9UJN7	358 aa		13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894	DIMT1	Q9UNQ2	313 aa	Known RBP	13.11	□□□□□ -0.31
HDLBP-238	ENST00000479894		A0A1W2PQL4	384 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	METTL15	A6NJ78	407 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	CDC14B	O60729	498 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	MRPS14	O60783	128 aa	Known RBP	13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	FOXH1	O75593	365 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	IGHA1	P01876	353 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	OTX1	P32242	354 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	RPS27	P42677	84 aa	Known RBP	13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	KRTAP27-1	Q3LI81	207 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	ZNF718	Q3SXZ3	478 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	KLF17	Q5JT82	389 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	SPATC1	Q76KD6	591 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	C1QL4	Q86Z23	238 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	BCL6B	Q8N143	479 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	SYS1	Q8N2H4	156 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	DEFB108B	Q8NET1	73 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	RAB1C	Q92928	201 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	MOB1A	Q9H8S9	216 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	LRRC42	Q9Y546	428 aa		13.1	□□□□□ -0.31
HDLBP-238	ENST00000479894	IGHV1-69-2	A0A0G2JMI3	117 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894		A0A1W2PPW3	197 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894		J3QRE1	110 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	SLC1A7	O00341	560 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	MT-ND5	P03915	603 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	LCAT	P04180	440 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	LCK	P06239	509 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	ACSM4	P0C7M7	580 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	SELE	P16581	610 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	OMG	P23515	440 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	MMP16	P51512	607 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	PSMA6	P60900	246 aa	Known RBP	13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	LCN2	P80188	198 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	ST3GAL4	Q11206	333 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	GALE	Q14376	348 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	SMN1	Q16637	294 aa	Known RBP	13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	RNLS	Q5VYX0	342 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	OTP	Q5XKR4	325 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	OLFML2A	Q68BL7	652 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	C9orf139	Q6ZV77	190 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	KIR3DL3	Q8N743	410 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	YIPF7	Q8N8F6	280 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	OR52I1	Q8NGK6	324 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	ABHD4	Q8TB40	342 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	TAF15	Q92804	592 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	GGH	Q92820	318 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	OR10A2	Q9H208	303 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	AASS	Q9UDR5	926 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	DUSP13	Q9UII6	198 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	ERGIC3	Q9Y282	383 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	PCDHGB5	Q9Y5G0	923 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	AUP1	Q9Y679	476 aa		13.09	□□□□□ -0.31
HDLBP-238	ENST00000479894	TMEM269	A0A1B0GVZ9	245 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	PIN1P1	O15428	100 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	PLXNB1	O43157	2135 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	XRCC2	O43543	280 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	ANXA2	P07355	339 aa	Known RBP	13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	CCL2	P13500	99 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	LIPA	P38571	399 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	CX3CR1	P49238	355 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	PRKX	P51817	358 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	HCCS	P53701	268 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	CCL8	P80075	99 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	DBP	Q10586	325 aa	Predicted RBP	13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	NKPD1	Q17RQ9	610 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	CDON	Q4KMG0	1287 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	ASPHD2	Q6ICH7	369 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	LRRN1	Q6UXK5	716 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	COLCA1	Q6ZS62	124 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	KLHL36	Q8N4N3	616 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	OR10S1	Q8NGN2	331 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	OR1J1	Q8NGS3	322 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	TBX5	Q99593	518 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	GAL3ST1	Q99999	423 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms