RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SLC38A9Q8NBW4 561 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 SULT4A1Q9BR01 284 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 NUDT22Q9BRQ3 303 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 GPR132Q9UNW8 380 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 RPH3AQ9Y2J0 694 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 NPIPB7O75200 414 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 HTR3BO95264 441 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 BCKDHBP21953 392 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 FBLP22087 321 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 ADH6P28332 368 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 C1orf140Q5VVS0 124 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 AWAT2Q6E213 333 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 SLC25A45Q8N413 288 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 PNLDC1Q8NA58 520 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 SLC26A10Q8NG04 563 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 OR6S1Q8NH40 331 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 IP6K3Q96PC2 410 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 AQP10Q96PS8 301 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 RTBDNQ9BSG5 229 aaPredicted RBP11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 RSRP1Q9BUV0 290 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 BANF2Q9H503 90 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 UCK1Q9HA47 277 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 TAF9BQ9HBM6 251 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 CACFD1Q9UGQ2 172 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 MMACHCQ9Y4U1 282 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 FLVCR1Q9Y5Y0 555 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 SDCBPO00560 298 aaPredicted RBP11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 PLPP3O14495 311 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 DXOO77932 396 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 SFT2D2O95562 160 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 TTRP02766 147 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 CSTBP04080 98 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 HOXB5P09067 269 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 FOLR2P14207 255 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 EMP2P54851 167 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 FBXW4P57775 412 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 CYCSP99999 105 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 SPEM2Q0P670 501 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 SMCO1Q147U7 214 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 FAM69BQ5VUD6 431 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 OGFOD3Q6PK18 319 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 MAFIPQ8WZ33 124 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 METTL8Q9H825 291 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 SMCO4Q9NRQ5 59 aa11.78□□□□□ -0.52
PDZRN3-208ENST00000479530 ASCC3Q8N3C0 2202 aaKnown RBP11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 PMS2P1A4D2B8 440 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 A6NLC8 198 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 GLRA1P23415 457 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 FABP9Q0Z7S8 132 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 BTNL8Q6UX41 500 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF101Q8IZC7 436 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 OR1N1Q8NGS0 311 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 KIRREL1Q96J84 757 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 C20orf24Q9BUV8 137 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 EGLN1Q9GZT9 426 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 LPAR5Q9H1C0 372 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 SLC26A1Q9H2B4 701 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 RPS10P5Q9NQ39 176 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 GHRLQ9UBU3 117 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 WIF1Q9Y5W5 379 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 UBE2CO00762 179 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 PIAS2O75928 621 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 SMIM6P0DI80 62 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 LYL1P12980 280 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 PGCP20142 388 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 SLC6A8P48029 635 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 NXPH1P58417 271 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 FOXK1P85037 733 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 FAM76BQ5HYJ3 339 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 DTWD2Q8NBA8 298 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 EDARADDQ8WWZ3 215 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 SAT2Q96F10 170 aaPredicted RBP11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 RAB18Q9NP72 206 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 MED29Q9NX70 200 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 VDAC3Q9Y277 283 aa11.77□□□□□ -0.53
PDZRN3-208ENST00000479530 C1orf196B1AJZ1 125 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 EIF1BO60739 113 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 BPNT1O95861 308 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 MPIG6BO95866 241 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF823P16415 610 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 EIF1P41567 113 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 TMEM50BP56557 158 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 CLDN6P56747 220 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 CLEC9AQ6UXN8 241 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 NUP54Q7Z3B4 507 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 PPP1R3BQ86XI6 285 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 SLC22A24Q8N4F4 322 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 ZNF251Q9BRH9 671 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 SMIM3Q9BZL3 60 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 FAM206AQ9NX38 181 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 MIOXQ9UGB7 285 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 hCG_1809904A0A1W2PP81 198 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 A0A1W2PR64 198 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 A0A1W2PRV1 198 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 TMEM14DPA8MWL7 114 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 MS4A18H0YCH9 400 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 TIAF1O95411 115 aa11.76□□□□□ -0.53
PDZRN3-208ENST00000479530 SFTPBP07988 381 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms