RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 KRT6BP04259 564 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 NCF1P14598 390 aaPredicted RBP3.36□□□□□ -1.87
CCDC171-207ENST00000478913 FUT3P21217 361 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 CD86P42081 329 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 MAGEA8P43361 318 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 KRT6CP48668 564 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 CAV2P51636 162 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 NCALDP61601 193 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 GNB2P62879 340 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 KCNJ2P63252 427 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 XIAPP98170 497 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 RAD51Q06609 339 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 RAB40BQ12829 278 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 TIGITQ495A1 244 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 DNAL1Q4LDG9 190 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 DUPD1Q68J44 220 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF573Q86YE8 665 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 MTURNQ8N3F0 131 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 FADS6Q8N9I5 356 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF740Q8NDX6 193 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 SLC5A11Q8WWX8 675 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 SNF8Q96H20 258 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF317Q96PQ6 595 aaPredicted RBP3.36□□□□□ -1.87
CCDC171-207ENST00000478913 PLIN2Q99541 437 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 IQCGQ9H095 443 aaKnown RBP3.36□□□□□ -1.87
CCDC171-207ENST00000478913 FAM96AQ9H5X1 160 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF282Q9UDV7 671 aaPredicted RBP3.36□□□□□ -1.87
CCDC171-207ENST00000478913 PCSK1NQ9UHG2 260 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 CD84Q9UIB8 345 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 PAIP2BQ9ULR5 123 aaKnown RBP3.36□□□□□ -1.87
CCDC171-207ENST00000478913 MAD1L1Q9Y6D9 718 aa3.36□□□□□ -1.87
CCDC171-207ENST00000478913 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 PKHD1L1Q86WI1 4243 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 A0A087X0T9 212 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 MDFIC2A0A1B0GVS7 189 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 CCDC160A6NGH7 325 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 SULT2B1O00204 365 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF264O43296 627 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 RIPK2O43353 540 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 TRAF3IP2O43734 574 aaPredicted RBP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 FKBP6O75344 327 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 CLDN11O75508 207 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 GLSO94925 669 aaPredicted RBP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 STAMBPO95630 424 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 KRT16P08779 473 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 FAM228BP0C875 321 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 UCHL3P15374 230 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 PRDX3P30048 256 aaKnown RBP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 SLCO1A2P46721 670 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 HSPA13P48723 471 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 KLK7P49862 253 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 SERPINB8P50452 374 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 SLC18A1P54219 525 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 MYL6P60660 151 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 RPL26P61254 145 aaKnown RBP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 EWSR1Q01844 656 aaKnown RBP eCLIP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 ASPHQ12797 758 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 PSG7Q13046 419 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 UAP1Q16222 522 aaPredicted RBP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 ZCWPW2Q504Y3 356 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 CFAP157Q5JU67 520 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 NCMAPQ5T1S8 102 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 CCDC137Q6PK04 289 aaKnown RBP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 C16orf62Q7Z3J2 963 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 NELFCDQ8IXH7 590 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 NRMQ8IXM6 262 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 CYP4Z2PQ8N1L4 340 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 CNEP1R1Q8N9A8 125 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 WFDC9Q8NEX5 89 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 OR4E2Q8NGC2 313 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 PNPT1Q8TCS8 783 aaKnown RBP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 ISG20Q96AZ6 181 aaKnown RBP3.35□□□□□ -1.87
CCDC171-207ENST00000478913 TIPINQ9BVW5 301 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 OR51J1Q9H342 316 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 GLIPR2Q9H4G4 154 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 TREM2Q9NZC2 230 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 SLC23A2Q9UGH3 650 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 TBK1Q9UHD2 729 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 DCDC2Q9UHG0 476 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 PCYOX1Q9UHG3 505 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 TFR2Q9UP52 801 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 GSTK1Q9Y2Q3 226 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 SNX24Q9Y343 169 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 IFT52Q9Y366 437 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 VPS13BQ7Z7G8 4022 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 ARFGEF3Q5TH69 2177 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
CCDC171-207ENST00000478913 EXOC1LA0A1B0GW35 172 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 K7N7A8 449 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 NOL3O60936 208 aaKnown RBP3.34□□□□□ -1.87
CCDC171-207ENST00000478913 UGT2B17O75795 530 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 RCBTB2O95199 551 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 TTC4O95801 387 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 IFNB1P01574 187 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 IGHV3-48P01763 117 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 PGCP20142 388 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 AQP1P29972 269 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 CD80P33681 288 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 COILP38432 576 aaPredicted RBP3.34□□□□□ -1.87
CCDC171-207ENST00000478913 SLC1A1P43005 524 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms