RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 G6PC2Q9NQR9 355 aa13.07□□□□□ -0.32
HMGA1-206ENST00000478214 GPR84Q9NQS5 396 aa13.07□□□□□ -0.32
HMGA1-206ENST00000478214 C14orf119Q9NWQ9 140 aa13.07□□□□□ -0.32
HMGA1-206ENST00000478214 FAM118AQ9NWS6 357 aa13.07□□□□□ -0.32
HMGA1-206ENST00000478214 C1orf123Q9NWV4 160 aa13.07□□□□□ -0.32
HMGA1-206ENST00000478214 RNF7Q9UBF6 113 aa13.07□□□□□ -0.32
HMGA1-206ENST00000478214 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.07□□□□□ -0.32
HMGA1-206ENST00000478214 PPIAL4AQ9Y536 164 aa13.07□□□□□ -0.32
HMGA1-206ENST00000478214 R4GMQ9 66 aa13.07□□□□□ -0.32
HMGA1-206ENST00000478214 ATRQ13535 2644 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 LOC100130705A0A1B0GUX0 176 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 A6NLC8 198 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 ZNF850A8MQ14 1090 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 F5H0A9 414 aaPredicted RBP13.06□□□□□ -0.32
HMGA1-206ENST00000478214 LOC110117498-PIK3R3F6TDL0 507 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 DLGAP1O14490 977 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 RPP14O95059 124 aaKnown RBP13.06□□□□□ -0.32
HMGA1-206ENST00000478214 CST4P01036 141 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 IGLV3-1P01715 115 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 KRT8P05787 483 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 SRD5A1P18405 259 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 GABRB1P18505 474 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 MTNR1AP48039 350 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 PRDX4Q13162 271 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 RCN1Q15293 331 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 SNCBQ16143 134 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 ZNF684Q5T5D7 378 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 BCL2L15Q5TBC7 163 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 MEDAGQ5VYS4 303 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 FAHD2BQ6P2I3 314 aaPredicted RBP13.06□□□□□ -0.32
HMGA1-206ENST00000478214 COMMD2Q86X83 199 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 ENTHD1Q8IYW4 607 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 GALNT4Q8N4A0 578 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 FTMTQ8N4E7 242 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 YIPF7Q8N8F6 280 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 BOLLQ8N9W6 283 aaKnown RBP13.06□□□□□ -0.32
HMGA1-206ENST00000478214 DEFB108BQ8NET1 73 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 PIGCQ92535 297 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 ITPKCQ96DU7 683 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 RNFT2Q96EX2 444 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 FAHD2AQ96GK7 314 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 FAM71F1Q96KD3 344 aaPredicted RBP13.06□□□□□ -0.32
HMGA1-206ENST00000478214 OR52A1Q9UKL2 312 aa13.06□□□□□ -0.32
HMGA1-206ENST00000478214 hCG_1807616A0A1W2PRN6 198 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 METTL15A6NJ78 407 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 ANXA2P2A6NMY6 339 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 FOXH1O75593 365 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 FSTL3O95633 263 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 TTRP02766 147 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 WNT2P09544 360 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 CD80P33681 288 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 MAP2K3P46734 347 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 CSNK2BP67870 215 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 ZNF85Q03923 595 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 LRRC36Q1X8D7 754 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 ZNF404Q494X3 552 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 LIPNQ5VXI9 398 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 ELMOD2Q8IZ81 293 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 OR1M1Q8NGA1 313 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 RHOXF1Q8NHV9 184 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 FGF23Q9GZV9 251 aaPredicted RBP13.05□□□□□ -0.32
HMGA1-206ENST00000478214 METTL17Q9H7H0 456 aaPredicted RBP13.05□□□□□ -0.32
HMGA1-206ENST00000478214 MOB1AQ9H8S9 216 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 SLC22A13Q9Y226 551 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 MPC1Q9Y5U8 109 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 SNX5Q9Y5X3 404 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 MXRA5Q9NR99 2828 aa13.05□□□□□ -0.32
HMGA1-206ENST00000478214 ZNF816-ZNF321PA0A0X1KG74 233 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 J3QRE1 110 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 SLC16A6O15403 523 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 PHF1O43189 567 aaPredicted RBP13.04□□□□□ -0.32
HMGA1-206ENST00000478214 ATP6V1B1P15313 513 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 RPS2P15880 293 aaKnown RBP13.04□□□□□ -0.32
HMGA1-206ENST00000478214 THBS2P35442 1172 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 SRP14P37108 136 aaKnown RBP13.04□□□□□ -0.32
HMGA1-206ENST00000478214 IL5RAQ01344 420 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 ZNF154Q13106 437 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 SFRP4Q6FHJ7 346 aaPredicted RBP13.04□□□□□ -0.32
HMGA1-206ENST00000478214 LYPD2Q6UXB3 125 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 GCSAMQ8N6F7 178 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 SEMA6DQ8NFY4 1073 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 HPSE2Q8WWQ2 592 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 OR5P3Q8WZ94 311 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 RTL8AQ9BWD3 113 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 SMPD3Q9NY59 655 aaPredicted RBP13.04□□□□□ -0.32
HMGA1-206ENST00000478214 MIOXQ9UGB7 285 aa13.04□□□□□ -0.32
HMGA1-206ENST00000478214 A0A0G2JMP0 313 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 A0A0X1KG70 313 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 A0A1B0GTI1 187 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 LGALS8O00214 317 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 P2RY10O00398 339 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 SULT1C4O75897 302 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 AVPP01185 164 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 LHBP01229 141 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 IFNA2P01563 188 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 FAHP16930 419 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms