RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, human

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM13-208	ENST00000478111	CCNB2	O95067	398 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	ANXA2	P07355	339 aa	Known RBP	13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	ATP6V1B2	P21281	511 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	TGM4	P49221	684 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	GRB2	P62993	217 aa	Known RBP	13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	TAF9	Q16594	264 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	METAP1D	Q6UB28	335 aa	Predicted RBP	13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	CYP2R1	Q6VVX0	501 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	FAM216B	Q8N7L0	139 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111		Q8N7P7	452 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	AQP11	Q8NBQ7	271 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	RNF133	Q8WVZ7	376 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	DMRTB1	Q96MA1	342 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	AMELY	Q99218	206 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	ABHD6	Q9BV23	337 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	FAM107B	Q9H098	131 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	VNN3	Q9NY84	501 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	RHBDD3	Q9Y3P4	386 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	TCRBV5S2	A0A599	114 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	RNASEK-C17orf49	H0YIS7	233 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	TIMM23	O14925	209 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	SOX14	O95416	240 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	GRK5	P34947	590 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	SLC15A1	P46059	708 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	GSK3A	P49840	483 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	DLX1	P56177	255 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	PRB3	Q04118	309 aa	Predicted RBP	13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	EIF2B1	Q14232	305 aa	Known RBP	13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	TIGD6	Q17RP2	521 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	SPATS1	Q496A3	300 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	DEFB107A	Q8IZN7	70 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	OR2T33	Q8NG76	320 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	OR6K6	Q8NGW6	343 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	ITPKC	Q96DU7	683 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	TOR3A	Q9H497	397 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	C16orf95	Q9H693	158 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	MED20	Q9H944	212 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	ARMC1	Q9NVT9	282 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	ZNRD1	Q9P1U0	126 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	TAGLN3	Q9UI15	199 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	PRPF19	Q9UMS4	504 aa	Known RBP	13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	BAIAP2	Q9UQB8	552 aa		13.72	□□□□□ -0.21
TRIM13-208	ENST00000478111	CDIPT	O14735	213 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	TIPRL	O75663	272 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	SELL	P14151	372 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	OPRL1	P41146	370 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	BLVRA	P53004	296 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	ZNF121	P58317	390 aa	Predicted RBP	13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	MICA	Q29983	383 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	STUM	Q69YW2	141 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	FAM57B	Q71RH2	274 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	SLC36A1	Q7Z2H8	476 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	GALNT4	Q8N4A0	578 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	OR5T2	Q8NGG2	359 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	C8orf46	Q8TAG6	207 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	TNFRSF14	Q92956	283 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	C12orf43	Q96C57	262 aa	Known RBP	13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	DCTN5	Q9BTE1	182 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	DGCR6L	Q9BY27	220 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	FGF23	Q9GZV9	251 aa	Predicted RBP	13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	WDR13	Q9H1Z4	485 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	DPAGT1	Q9H3H5	408 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	SIRT7	Q9NRC8	400 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	CMC2	Q9NRP2	79 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	DNAJC27	Q9NZQ0	273 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	ACTR3B	Q9P1U1	418 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	ONECUT1	Q9UBC0	465 aa		13.71	□□□□□ -0.21
TRIM13-208	ENST00000478111	FAM183A	A6NL82	134 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	GPR37	O15354	613 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	NDUFB3	O43676	98 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	HSD11B1	P28845	292 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	NAA10	P41227	235 aa	Predicted RBP	13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	FAM76B	Q5HYJ3	339 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	C16orf89	Q6UX73	402 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	GDPGP1	Q6ZNW5	385 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	ERI1	Q8IV48	349 aa	Known RBP	13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	TIGD4	Q8IY51	512 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	OR52H1	Q8NGJ2	320 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	NPRL2	Q8WTW4	380 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	SP140L	Q9H930	580 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	HAO2	Q9NYQ3	351 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	FAM96B	Q9Y3D0	163 aa		13.7	□□□□□ -0.22
TRIM13-208	ENST00000478111	TSPAN9	O75954	239 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	TSPAN15	O95858	294 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	APOC1	P02654	83 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	TFF1	P04155	84 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	FBP1	P09467	338 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	ACKR3	P25106	362 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	MXRA7	P84157	204 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	KLRD1	Q13241	179 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	IKZF1	Q13422	519 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	CD300LD	Q6UXZ3	194 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	ZNF788	Q6ZQV5	615 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	CSNK2A3	Q8NEV1	391 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	OR10Z1	Q8NGY1	313 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	OR6N2	Q8NGY6	317 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	LRTOMT	Q8WZ04	291 aa		13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	RPL3L	Q92901	407 aa	Known RBP	13.69	□□□□□ -0.22
TRIM13-208	ENST00000478111	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms