RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 GAR1Q9NY12 217 aaKnown RBP8.08□□□□□ -1.12
SMARCB1-206ENST00000477836 ERVK-18Q9QC07 812 aa8.08□□□□□ -1.12
SMARCB1-206ENST00000477836 COMMD3-BMI1R4GMX3 469 aa8.08□□□□□ -1.12
SMARCB1-206ENST00000477836 HERC2O95714 4834 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 PLSCR5A0PG75 271 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 SLC16A7O60669 478 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 GLCEO94923 617 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 APOL3O95236 402 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 FADS2O95864 444 aaKnown RBP8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 IGHV3-13P01766 116 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 MT-ND2P03891 347 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 CDK1P06493 297 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 HTR1AP08908 422 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 MYL12AP19105 171 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 GSTT1P30711 240 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 PYCR1P32322 319 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 IER3P46695 156 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 CSNK1A1P48729 337 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 CENPAP49450 140 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 MMP15P51511 669 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 BLVRAP53004 296 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 UCP2P55851 309 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 FGF12P61328 243 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 BTG1P62324 171 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 ACTC1P68032 377 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 ACTA1P68133 377 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 ST3GAL4Q11206 333 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 ZMYND11Q15326 602 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 TBCEQ15813 527 aaPredicted RBP8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 KLHL22Q53GT1 634 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 SHFQ7M4L6 423 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 PRSS48Q7RTY5 328 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 TMEM123Q8N131 208 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 LYG1Q8N1E2 194 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 OR51L1Q8NGJ5 315 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 OR52I1Q8NGK6 324 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 OR6N1Q8NGY5 312 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 FGFBP3Q8TAT2 258 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 GGHQ92820 318 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 PTP4A1Q93096 173 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 LGALS12Q96DT0 336 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 TMEM80Q96HE8 168 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 DDOQ99489 341 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 NUAK2Q9H093 628 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 CDH20Q9HBT6 801 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 ADGRL4Q9HBW9 690 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 TMEM106BQ9NUM4 274 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 HAO2Q9NYQ3 351 aa8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 DIMT1Q9UNQ2 313 aaKnown RBP8.07□□□□□ -1.12
SMARCB1-206ENST00000477836 IGLV1-36A0A0B4J1U3 117 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 KIR2DS1A0A191URI9 304 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 ZSCAN5BA6NJL1 495 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 CEACAM18A8MTB9 384 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 TNFRSF13BO14836 293 aaPredicted RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 MYL12BO14950 172 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 KHDRBS3O75525 346 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 TSPAN9O75954 239 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 HLA-DQA2P01906 255 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 MRPL3P09001 348 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 WNT2P09544 360 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 CTLA4P16410 223 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 DCKP27707 260 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 NAA10P41227 235 aaPredicted RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 FMODQ06828 376 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 BLMHQ13867 455 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 NHLRC1Q6VVB1 395 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNF627Q7L945 461 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 C20orf196Q8IYI0 205 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 OR6V1Q8N148 313 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 OR10H4Q8NGA5 316 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 OR4S1Q8NGB4 309 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 OR1J1Q8NGS3 322 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 DACT3Q96B18 629 aaPredicted RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 TSSK2Q96PF2 358 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 RBP7Q96R05 134 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 SIGLEC11Q96RL6 698 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 TEAD3Q99594 435 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 FOXB1Q99853 325 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 B9D2Q9BPU9 175 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 NUDT16L1Q9BRJ7 211 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 PCGF1Q9BSM1 259 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 MRPL13Q9BYD1 178 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 ULBP2Q9BZM5 246 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 BCL2L14Q9BZR8 327 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 SRA1Q9HD15 236 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 FGF20Q9NP95 211 aaPredicted RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 B3GAT2Q9NPZ5 323 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 MRPS18AQ9NVS2 196 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 CHCHD3Q9NX63 227 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 FOXJ3Q9UPW0 622 aa8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 EXOSC1Q9Y3B2 195 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-206ENST00000477836 A0A1W2PPL8 197 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 WI2-2373I1.2A0A1W2PRP0 233 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 TRIM64CA6NLI5 447 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 DCTN6O00399 190 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 SELENOFO60613 162 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 IGHA1P01876 353 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 RPS2P15880 293 aaKnown RBP8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 C21orf33P30042 268 aaPredicted RBP8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 NEDD8Q15843 81 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms