RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ZNF181Q2M3W8 571 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 OR8H2Q8N162 312 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 GDPD1Q8N9F7 314 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 RELL2Q8NC24 303 aaPredicted RBP12.46□□□□□ -0.41
COL4A6-206ENST00000477085 FOXRED1Q96CU9 486 aaPredicted RBP12.46□□□□□ -0.41
COL4A6-206ENST00000477085 SORCS2Q96PQ0 1159 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 UQCC2Q9BRT2 126 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 TBCCD1Q9NVR7 557 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 ZGRF1Q86YA3 2104 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 ICMTO60725 284 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 IGLV1-44P01699 117 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 IL7P13232 177 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 ARSBP15848 533 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 PSMB1P20618 241 aaKnown RBP12.46□□□□□ -0.42
COL4A6-206ENST00000477085 PTBP1P26599 531 aaKnown RBP eCLIP12.46□□□□□ -0.42
COL4A6-206ENST00000477085 OR3A4PP47883 348 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 ART1P52961 327 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 SCAND1P57086 179 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 TBC1D28Q2M2D7 210 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 C1QL2Q7Z5L3 287 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 ST6GALNAC3Q8NDV1 305 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 UBASH3BQ8TF42 649 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 HAVCR1Q96D42 359 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 WBP1Q96G27 269 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.42
COL4A6-206ENST00000477085 RHBDL2Q9NX52 303 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 JKAMPQ9P055 326 aa12.46□□□□□ -0.42
COL4A6-206ENST00000477085 RP1L1Q8IWN7 2480 aaPredicted RBP12.45□□□□□ -0.42
COL4A6-206ENST00000477085 IGKV1-27A0A075B6S5 117 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 EEF1E1-BLOC1S5C9J1V9 151 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 EEF1E1O43324 174 aaKnown RBP12.45□□□□□ -0.42
COL4A6-206ENST00000477085 LANCL1O43813 399 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 LILRA1O75019 489 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 HLA-DQB1P01920 261 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 HCKP08631 526 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 CECR9P0C854 216 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 ZNF35P13682 527 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 ERVS71-1P61550 626 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 KISS1Q15726 138 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 C11orf91Q3C1V1 193 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 ANGPTL5Q86XS5 388 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 OR56B2PQ8NGI1 322 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 PIGTQ969N2 578 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 RFT1Q96AA3 541 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 PIGMQ9H3S5 423 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 TBC1D24Q9ULP9 559 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 MEMO1Q9Y316 297 aa12.45□□□□□ -0.42
COL4A6-206ENST00000477085 SMG1Q96Q15 3661 aaKnown RBP12.45□□□□□ -0.42
COL4A6-206ENST00000477085 TRGV8A0A0C4DH27 118 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 A0A1W2PQ09 198 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 SMPD2O60906 423 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 ERCC1P07992 297 aaPredicted RBP12.44□□□□□ -0.42
COL4A6-206ENST00000477085 FAM157BP0CG42 384 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 SFTPCP11686 197 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 IL32P24001 234 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 CDK2P24941 298 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 HOXC12P31275 282 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 CCKARP32238 428 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 TALDO1P37837 337 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 PTH2RP49190 550 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 MALLQ13021 153 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 UNC119Q13432 240 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 TMEM255AQ5JRV8 349 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 CLVS2Q5SYC1 327 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 SPATA46Q5T0L3 261 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 KRT74Q7RTS7 529 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 CDH26Q8IXH8 852 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 Q8N402 240 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 CCDC120Q96HB5 630 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 VKORC1Q9BQB6 163 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 FGF23Q9GZV9 251 aaPredicted RBP12.44□□□□□ -0.42
COL4A6-206ENST00000477085 OBP2BQ9NPH6 170 aa12.44□□□□□ -0.42
COL4A6-206ENST00000477085 MRPS7Q9Y2R9 242 aaKnown RBP12.44□□□□□ -0.42
COL4A6-206ENST00000477085 SHANK1Q9Y566 2161 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 ERVH48-1M5A8F1 160 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 CTAG2O75638 210 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 KDM4BO94953 1096 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 NRASP01111 189 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 VSIG8P0DPA2 414 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 PTHLHP12272 177 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 TIMM23BQ5SRD1 257 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 Q6ZNX1 250 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 MRGPRGQ86SM5 289 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 OR5D18Q8NGL1 313 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 RAB40AQ8WXH6 277 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 PIGCQ92535 297 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 S100A16Q96FQ6 103 aaKnown RBP12.43□□□□□ -0.42
COL4A6-206ENST00000477085 NPAP1Q9NZP6 1156 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 GPR160Q9UJ42 338 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 KALRNO60229 2985 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 ZNF816-ZNF321PA0A0X1KG74 233 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 ZNF850A8MQ14 1090 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 CALCRP30988 508 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 CA7P43166 264 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 UCP2P55851 309 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 TAB1Q15750 504 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 RGS21Q2M5E4 152 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 PYHIN1Q6K0P9 492 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 MTFR2Q6P444 385 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms