RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DNTTIP1Q9H147 329 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 TLNRD1Q9H1K6 362 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 WDR13Q9H1Z4 485 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 ANKRD19PQ9H560 264 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 TMBIM4Q9HC24 238 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 RPRD1BQ9NQG5 326 aaKnown RBP9.2□□□□□ -0.94
BRCA1-213ENST00000476777 SNTG1Q9NSN8 517 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 MRPL22Q9NWU5 206 aaKnown RBP9.2□□□□□ -0.94
BRCA1-213ENST00000476777 HAO2Q9NYQ3 351 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 SLC25A10Q9UBX3 287 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-213ENST00000476777 ZNF391Q9UJN7 358 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 RAB21Q9UL25 225 aa9.2□□□□□ -0.94
BRCA1-213ENST00000476777 ANKRD30BLA7E2S9 258 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 CDIPTO14735 213 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 HLA-DQA2P01906 255 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 NAA10P41227 235 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-213ENST00000476777 GSK3BP49841 420 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 CAV3P56539 151 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 GMFBP60983 142 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 ZNF788Q6ZQV5 615 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 OR2T12Q8NG77 320 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 OR4K13Q8NH42 304 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 ANGPTL6Q8NI99 470 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 SPSB4Q96A44 273 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 ERMAPQ96PL5 475 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-213ENST00000476777 RAB3IPQ96QF0 476 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-213ENST00000476777 CDCA4Q9BXL8 241 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 OPA3Q9H6K4 179 aa9.19□□□□□ -0.94
BRCA1-213ENST00000476777 DNAH7Q8WXX0 4024 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 A0A1W2PRQ8 180 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 A0A1W2PRX2 142 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 OR6C68A6NDL8 312 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 UNC119BA6NIH7 251 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 NKX6-3A6NJ46 265 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 VGLL3A8MV65 326 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 H0YAE9 185 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 SIGLEC5O15389 551 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 TIPRLO75663 272 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 RENP00797 406 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 NPPAP01160 153 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 TROVE2P10155 538 aaKnown RBP eCLIP9.18□□□□□ -0.94
BRCA1-213ENST00000476777 SLC2A1P11166 492 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 HIST1H1CP16403 213 aaKnown RBP9.18□□□□□ -0.94
BRCA1-213ENST00000476777 NDUFB7P17568 137 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 POU1F1P28069 291 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 NOS3P29474 1203 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 DDOSTP39656 456 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 RPS27P42677 84 aaKnown RBP9.18□□□□□ -0.94
BRCA1-213ENST00000476777 SLC35A2P78381 396 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 MXRA7P84157 204 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 CD83Q01151 205 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 COL10A1Q03692 680 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 EGFEM1PQ0D2K5 195 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 DGCR6Q14129 220 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 IFI44LQ53G44 452 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 COQ5Q5HYK3 327 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 SMARCD3Q6STE5 483 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 MED30Q96HR3 178 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 RCC1LQ96I51 464 aaKnown RBP9.18□□□□□ -0.94
BRCA1-213ENST00000476777 OR5M11Q96RB7 305 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 TMEM120AQ9BXJ8 343 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 FN3KQ9H479 309 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 PPP1R3EQ9H7J1 279 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 ELL3Q9HB65 397 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-213ENST00000476777 KCNG2Q9UJ96 466 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 SACSQ9NZJ4 4579 aa9.18□□□□□ -0.94
BRCA1-213ENST00000476777 ARPC3O15145 178 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 XRCC2O43543 280 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 PEX14O75381 377 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 ZNF682O95780 498 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 ACAA1P09110 424 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-213ENST00000476777 PSKH1P11801 424 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 RAB13P51153 203 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 PRKXP51817 358 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 FAM3AP98173 230 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 CNN3Q15417 329 aaKnown RBP9.17□□□□□ -0.94
BRCA1-213ENST00000476777 SEC23BQ15437 767 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 Q6ZS46 218 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 SLC16A9Q7RTY1 509 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 MKXQ8IYA7 352 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 CYB561A3Q8NBI2 242 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 OR10Z1Q8NGY1 313 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 HSH2DQ96JZ2 352 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 COPS4Q9BT78 406 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 PRSS22Q9GZN4 317 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 TCF19Q9Y242 345 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 N6AMT1Q9Y5N5 214 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 ENPP4Q9Y6X5 453 aa9.17□□□□□ -0.94
BRCA1-213ENST00000476777 TRBV23-1A0A0A0MS06 115 aa9.16□□□□□ -0.94
BRCA1-213ENST00000476777 TRBV4-1A0A0J9YWV2 114 aa9.16□□□□□ -0.94
BRCA1-213ENST00000476777 A6NDX4 124 aa9.16□□□□□ -0.94
BRCA1-213ENST00000476777 MRASO14807 208 aa9.16□□□□□ -0.94
BRCA1-213ENST00000476777 AKR7A2O43488 359 aa9.16□□□□□ -0.94
BRCA1-213ENST00000476777 H1F0P07305 194 aaKnown RBP9.16□□□□□ -0.94
BRCA1-213ENST00000476777 PF4V1P10720 104 aa9.16□□□□□ -0.94
BRCA1-213ENST00000476777 ZNF823P16415 610 aa9.16□□□□□ -0.94
BRCA1-213ENST00000476777 PAICSP22234 425 aaKnown RBP9.16□□□□□ -0.94
BRCA1-213ENST00000476777 HOXD3P31249 432 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-213ENST00000476777 TMEM95Q3KNT9 176 aa9.16□□□□□ -0.94
BRCA1-213ENST00000476777 FKBP9P1Q75LS8 142 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms