RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 FLNAP21333 2647 aaKnown RBP6.09□□□□□ -1.44
SHQ1-207ENST00000475558 A0A0G2JNJ9 132 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 C5orf49A4QMS7 147 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 ANXA2P2A6NMY6 339 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 MAGEB4O15481 346 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 DHRS3O75911 302 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 SCGNO76038 276 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 BPNT1O95861 308 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 IGKV3-15P01624 115 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 IGLV3-1P01715 115 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 HLA-HP01893 362 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 TTRP02766 147 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 OCMP0CE72 109 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 UBBP0CG47 229 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 CALCBP10092 127 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 EPXP11678 715 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 FSTP19883 344 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 RAB3AP20336 220 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 CFPP27918 469 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 THBS4P35443 961 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 RPS27P42677 84 aaKnown RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 KIR3DL2P43630 455 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 RPS23P62266 143 aaKnown RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 FOXF2Q12947 444 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 RIN1Q13671 783 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 SPCS2Q15005 226 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 RSPO1Q2MKA7 263 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 DDI2Q5TDH0 399 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 VWA1Q6PCB0 445 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF474Q6S9Z5 364 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 STAC2Q6ZMT1 411 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 FAM57BQ71RH2 274 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 CXorf67Q86X51 503 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 SPERTQ8NA61 448 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 DNAAF1Q8NEP3 725 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 SLC30A7Q8NEW0 376 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 AKR7LQ8NHP1 331 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 RPL3LQ92901 407 aaKnown RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 PIGTQ969N2 578 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 SPSB1Q96BD6 273 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 MBD6Q96DN6 1003 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 KCNS3Q9BQ31 491 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 DCUN1D5Q9BTE7 237 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 WDR12Q9GZL7 423 aaKnown RBP6.08□□□□□ -1.44
SHQ1-207ENST00000475558 PLEKHA1Q9HB21 404 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 NOX4Q9NPH5 578 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 GPR84Q9NQS5 396 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 Q9UFV3 132 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 SLC7A11Q9UPY5 501 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 V9GYS6 101 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 JMJD1CQ15652 2540 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 MPDZO75970 2070 aa6.08□□□□□ -1.44
SHQ1-207ENST00000475558 CSPG4Q6UVK1 2322 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 A0A1B0GTI1 187 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 IFITM5A6NNB3 132 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 PRR32B1ATL7 298 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 AIPO00170 330 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 P2RY10O00398 339 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 TBX1O43435 398 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF780AO75290 641 aaPredicted RBP6.07□□□□□ -1.44
SHQ1-207ENST00000475558 RAD51DO75771 328 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 LYZL6O75951 148 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 IGLV1-44P01699 117 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 CRYAAP02489 173 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 RAC2P15153 192 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 BMP5P22003 454 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 CCNOP22674 350 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 NR4A1P22736 598 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 PTAFRP25105 342 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 BDKRB2P30411 391 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 TALDO1P37837 337 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 KIR2DL3P43628 341 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 ASCL1P50553 236 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 UCP2P55851 309 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 PITPNAQ00169 270 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 SORDQ00796 357 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 GPR176Q14439 515 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF846Q147U1 533 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 PPA1Q15181 289 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 CNN3Q15417 329 aaKnown RBP6.07□□□□□ -1.44
SHQ1-207ENST00000475558 HIKESHIQ53FT3 197 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 SPANXN2Q5MJ10 180 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 CLVS2Q5SYC1 327 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 C9orf135Q5VTT2 229 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 SEZ6L2Q6UXD5 910 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 TMEM108Q6UXF1 575 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 BAIAP2L2Q6UXY1 529 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 MDP1Q86V88 176 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 COMMD2Q86X83 199 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 RFLNBQ8N5W9 214 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 WDR31Q8NA23 367 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 PNLDC1Q8NA58 520 aaKnown RBP6.07□□□□□ -1.44
SHQ1-207ENST00000475558 CPEB3Q8NE35 698 aaKnown RBP6.07□□□□□ -1.44
SHQ1-207ENST00000475558 OR8B12Q8NGG6 310 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 OR6Q1Q8NGQ2 317 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 OR14K1Q8NGZ2 314 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 NDNFQ8TB73 568 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 OR51E1Q8TCB6 317 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms