RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ADGRE4PQ86SQ3 457 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 FAM24BQ8N5W8 94 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 ZIC4Q8N9L1 334 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 OR4D6Q8NGJ1 314 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 OTOSQ8NHW6 89 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 ISOC2Q96AB3 205 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 FAM71F1Q96KD3 344 aaPredicted RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 PFDN5Q99471 154 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 G6PC3Q9BUM1 346 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 OPN3Q9H1Y3 402 aaPredicted RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 KCNK15Q9H427 330 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 KLHL31Q9H511 634 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 XKR8Q9H6D3 395 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 FCF1Q9Y324 198 aaKnown RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 FER1L5A0AVI2 2057 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 C9orf172C9J069 976 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 PPP5D1E7EU14 171 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 PRR23D1E9PI22 279 aaPredicted RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 TMPRSS2O15393 492 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 NDUFS4O43181 175 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 AGR2O95994 175 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 PRR23D2P0DMB1 279 aaPredicted RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 MMP9P14780 707 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 NME2P22392 152 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 HSD11B1P28845 292 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 WNT5AP41221 380 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 RAB2AP61019 212 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 EIF5AP63241 154 aaKnown RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 MESP2Q0VG99 397 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 TANGO2Q6ICL3 276 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 SSX7Q7RTT5 188 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 ZAR1Q86SH2 424 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 CACUL1Q86Y37 369 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 LFNGQ8NES3 379 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 ZFP3Q96NJ6 502 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 P2RX4Q99571 388 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 ATG5Q9H1Y0 275 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 SEMA5BQ9P283 1151 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 OR14J1Q9UGF5 321 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 MRPS33Q9Y291 106 aaKnown RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 OR10H1Q9Y4A9 318 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 MGAT4DA6NG13 374 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 J3QR06 171 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 EIF1AYO14602 144 aaKnown RBP3.59□□□□□ -1.84
USP16-205ENST00000474835 CCL25O15444 150 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 SCAF4O95104 1147 aaKnown RBP3.59□□□□□ -1.84
USP16-205ENST00000474835 DBIP07108 87 aaKnown RBP3.59□□□□□ -1.84
USP16-205ENST00000474835 HOXC12P31275 282 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 PYCR1P32322 319 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 PRSS3P35030 304 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 EIF1AXP47813 144 aaKnown RBP3.59□□□□□ -1.84
USP16-205ENST00000474835 LHX2P50458 406 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 LMAN2Q12907 356 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 FAM53BQ14153 422 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 CD226Q15762 336 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 TMEM184AQ6ZMB5 413 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 CYB561A3Q8NBI2 242 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 MFSD9Q8NBP5 474 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 OR10S1Q8NGN2 331 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 OR1P1Q8NH06 330 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 GLYATL1Q969I3 302 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 TSPAN32Q96QS1 320 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 LGR4Q9BXB1 951 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 CTDSP1Q9GZU7 261 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 SPRTNQ9H040 489 aaPredicted RBP3.59□□□□□ -1.84
USP16-205ENST00000474835 ATG10Q9H0Y0 220 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 GPR84Q9NQS5 396 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 FBXO34Q9NWN3 711 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 ZNF319Q9P2F9 582 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 SLC25A13Q9UJS0 675 aa3.59□□□□□ -1.84
USP16-205ENST00000474835 CFAP47Q6ZTR5 3102 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 MUC3AQ02505 3323 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TRBV2A0A0J9YWF9 115 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 C1QTNF9BB2RNN3 333 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 H3BQ15 152 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 K7EPK0 472 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TNFRSF13BO14836 293 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 CRXO43186 299 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 CYB5R3P00387 301 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 OR4Q2P0C623 313 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 VSIG8P0DPA2 414 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CD99P14209 185 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 FGF7P21781 194 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 HIST1H1TP22492 207 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 SERPINA4P29622 427 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CTNNB1P35222 781 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 RND3P61587 244 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 RASGEF1BQ0VAM2 473 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 SLC17A1Q14916 467 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 FNDC3BQ53EP0 1204 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 RNFT1Q5M7Z0 435 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 PLPP4Q5VZY2 271 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 UFSP1Q6NVU6 142 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 BHLHA15Q7RTS1 189 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 RNF144BQ7Z419 303 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 RABEPKQ7Z6M1 372 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CDK20Q8IZL9 346 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 FBXL14Q8N1E6 418 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 METTL21AQ8WXB1 218 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 POM121Q96HA1 1249 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms