RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SPICQ8N5J4 248 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 LINC01356Q8N9X3 169 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 CNIH3Q8TBE1 160 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 DVL3Q92997 716 aaPredicted RBP11.61□□□□□ -0.55
USF1-205ENST00000473969 LYZL4Q96KX0 146 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 RTL8AQ9BWD3 113 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 G6PC2Q9NQR9 355 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 CHCHD3Q9NX63 227 aaKnown RBP11.61□□□□□ -0.55
USF1-205ENST00000473969 UBAP1Q9NZ09 502 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 ENPP5Q9UJA9 477 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 KCNS2Q9ULS6 477 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 hCG_1807616A0A1W2PRN6 198 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ZNF850A8MQ14 1090 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 A8MV72 311 aaPredicted RBP11.6□□□□□ -0.55
USF1-205ENST00000473969 B4DSR2 109 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 TMEM178BH3BS89 294 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 DHRS3O75911 302 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 CYB5R3P00387 301 aaPredicted RBP11.6□□□□□ -0.55
USF1-205ENST00000473969 CST4P01036 141 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 TGFAP01135 160 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 TTRP02766 147 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 HTR1AP08908 422 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 BTG1P62324 171 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 PRDX4Q13162 271 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 GALEQ14376 348 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ODF4Q2M2E3 257 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ZNF181Q2M3W8 571 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 CDONQ4KMG0 1287 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ZNF684Q5T5D7 378 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 DOK3Q7L591 496 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 LHFPL3Q86UP9 236 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ZDHHC23Q8IYP9 409 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 APH1BQ8WW43 257 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 PPP1R14AQ96A00 147 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ALG8Q9BVK2 526 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ZNF665Q9H7R5 613 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 PLEKHA1Q9HB21 404 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ACOXLQ9NUZ1 547 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 MRPS18AQ9NVS2 196 aaKnown RBP11.6□□□□□ -0.55
USF1-205ENST00000473969 C1orf123Q9NWV4 160 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 RNF7Q9UBF6 113 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 SLC22A13Q9Y226 551 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 PIGLQ9Y2B2 252 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 ZFHX3Q15911 3703 aa11.6□□□□□ -0.55
USF1-205ENST00000473969 SETD2Q9BYW2 2564 aaPredicted RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 PPIAL4EA0A075B759 164 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 PPIAL4DF5H284 164 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 H0YJX3 145 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 J3QRE1 110 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 P2RY10O00398 339 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 SYT7O43581 403 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 FAM20BO75063 409 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 SRSF10O75494 262 aaKnown RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 WBP4O75554 376 aaKnown RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 UBCP0CG48 685 aaKnown RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 PPIAL4FP0DN26 164 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 ZNF12P17014 697 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 ZNF16P17020 682 aaPredicted RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 ACKR3P25106 362 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 DCKP27707 260 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 IL2RGP31785 369 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 PSMB10P40306 273 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 MDH2P40926 338 aaKnown RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 OR12D2P58182 307 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 ISL1P61371 349 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 MRPL28Q13084 256 aaKnown RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 C6orf52Q5T4I8 152 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 ZBTB37Q5TC79 503 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 LRRC28Q86X40 367 aaPredicted RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 CATSPERDQ86XM0 798 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 EGFL6Q8IUX8 553 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 BOLLQ8N9W6 283 aaKnown RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 CCDC54Q8NEL0 328 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 OR52I1Q8NGK6 324 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 Q8TCH9 128 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 RORBQ92753 470 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 MSI2Q96DH6 328 aaKnown RBP11.59□□□□□ -0.55
USF1-205ENST00000473969 RNF170Q96K19 258 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 C4orf36Q96KX1 117 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 SOX7Q9BT81 388 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 DCAF16Q9NXF7 216 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 MYRFQ9Y2G1 1151 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 PPIAL4AQ9Y536 164 aa11.59□□□□□ -0.55
USF1-205ENST00000473969 TMEM210A6NLX4 147 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 WNT9BO14905 357 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 LMX1BO60663 402 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 IGHV2-70P01814 119 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 IGHA1P01876 353 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 MYL12AP19105 171 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 PCMT1P22061 227 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 GBX2P52951 348 aaPredicted RBP11.58□□□□□ -0.56
USF1-205ENST00000473969 KRTAP1-1Q07627 177 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 MPPED2Q15777 294 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 KCNJ8Q15842 424 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 SMN1Q16637 294 aaKnown RBP11.58□□□□□ -0.56
USF1-205ENST00000473969 TMEM155Q4W5P6 130 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 TMEM244Q5VVB8 128 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 PLCXD3Q63HM9 321 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 TMPRSS11AQ6ZMR5 421 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 MOB3CQ70IA8 216 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms