RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 FAM86B1Q8N7N1 296 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 BEND2Q8NDZ0 799 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 OR1M1Q8NGA1 313 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 C8orf46Q8TAG6 207 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 LRRC29Q8WV35 223 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 SSX3Q99909 188 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 B9D2Q9BPU9 175 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 TMEM120AQ9BXJ8 343 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 SLC22A4Q9H015 551 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 ANKRD19PQ9H560 264 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 SNTG1Q9NSN8 517 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 SERTAD4Q9NUC0 356 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 MRPL15Q9P015 296 aaKnown RBP7.57□□□□□ -1.2
VCL-204ENST00000472585 ZNF319Q9P2F9 582 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 PCDHGB5Q9Y5G0 923 aa7.57□□□□□ -1.2
VCL-204ENST00000472585 TENM2Q9NT68 2774 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 hCG_1807616A0A1W2PRN6 198 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 TVP23AA6NH52 213 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 A6NLC8 198 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 CDIPTO14735 213 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 ARPC3O15145 178 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 H1F0P07305 194 aaKnown RBP7.56□□□□□ -1.2
VCL-204ENST00000472585 MUC1P15941 1255 aaPredicted RBP7.56□□□□□ -1.2
VCL-204ENST00000472585 PYCR1P32322 319 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 IFNA8P32881 189 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 MSX2P35548 267 aaPredicted RBP7.56□□□□□ -1.2
VCL-204ENST00000472585 RPS6KA3P51812 740 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 PRKXP51817 358 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 UBE2E1P51965 193 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 ERVFRD-1P60508 538 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 GMFBP60983 142 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 FAM3AP98173 230 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 DCTN2Q13561 401 aaKnown RBP7.56□□□□□ -1.2
VCL-204ENST00000472585 MICBQ29980 383 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 STUMQ69YW2 141 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 PGM2L1Q6PCE3 622 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 SMARCD3Q6STE5 483 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 Q6ZS46 218 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 CMTM4Q8IZR5 234 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 DYNAPQ8N1N2 210 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 C11orf42Q8N5U0 333 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 SDR9C7Q8NEX9 313 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 OR52J3Q8NH60 311 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 LZICQ8WZA0 190 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 SPSB4Q96A44 273 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 SGK3Q96BR1 496 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 GAFA1Q96PS6 74 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 MEGF9Q9H1U4 602 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 OR52D1Q9H346 318 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 RNPEPL1Q9HAU8 725 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 ELL3Q9HB65 397 aaPredicted RBP7.56□□□□□ -1.2
VCL-204ENST00000472585 RAB18Q9NP72 206 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 TRIM36Q9NQ86 728 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 INTS9Q9NV88 658 aaKnown RBP7.56□□□□□ -1.2
VCL-204ENST00000472585 TMEM5Q9Y2B1 443 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 MAB21L2Q9Y586 359 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 N6AMT1Q9Y5N5 214 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 CAPN7Q9Y6W3 813 aa7.56□□□□□ -1.2
VCL-204ENST00000472585 WI2-2373I1.2A0A1W2PRP0 233 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 PEX14O75381 377 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 GSK3BP49841 420 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 MXRA7P84157 204 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 SLC35F1Q5T1Q4 408 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 C8orf82Q6P1X6 216 aaPredicted RBP7.55□□□□□ -1.2
VCL-204ENST00000472585 ZNF788Q6ZQV5 615 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 FKBP9P1Q75LS8 142 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 RRM2BQ7LG56 351 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 PRSS45Q7RTY3 260 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 CYB561A3Q8NBI2 242 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 OR51L1Q8NGJ5 315 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 OR2AJ1Q8NGZ0 328 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 ANGPTL6Q8NI99 470 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 DYDC1Q8WWB3 177 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 RCN3Q96D15 328 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 DUS3LQ96G46 650 aaKnown RBP7.55□□□□□ -1.2
VCL-204ENST00000472585 DHRS1Q96LJ7 313 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 DMRTB1Q96MA1 342 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 CITED2Q99967 270 aaPredicted RBP7.55□□□□□ -1.2
VCL-204ENST00000472585 FAM234AQ9H0X4 552 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 TLNRD1Q9H1K6 362 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 RANBP3Q9H6Z4 567 aaPredicted RBP7.55□□□□□ -1.2
VCL-204ENST00000472585 ZNF702PQ9H963 129 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 HAO2Q9NYQ3 351 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 ZNF391Q9UJN7 358 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 AURKCQ9UQB9 309 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 RHBDD3Q9Y3P4 386 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 U3KQK5 164 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 BIRC6Q9NR09 4857 aa7.55□□□□□ -1.2
VCL-204ENST00000472585 ELOA3CA0A087WX78 387 aaPredicted RBP7.54□□□□□ -1.2
VCL-204ENST00000472585 BBIP1A8MTZ0 92 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 NDUFB3O43676 98 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 HLA-DQA2P01906 255 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 NHLRC4P0CG21 123 aaPredicted RBP7.54□□□□□ -1.2
VCL-204ENST00000472585 TROVE2P10155 538 aaKnown RBP eCLIP7.54□□□□□ -1.2
VCL-204ENST00000472585 FAHP16930 419 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 NOS3P29474 1203 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 RAB13P51153 203 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 BMXP51813 675 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 KRTAP10-11P60412 298 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 SLC35A2P78381 396 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms