RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 KCNAB3O43448 404 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 HLA-AP01891 365 aaKnown RBP13.16□□□□□ -0.3
UBXN11-213ENST00000472155 PPP3CBP16298 524 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 PI3P19957 117 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 FKBP2P26885 142 aaKnown RBP13.16□□□□□ -0.3
UBXN11-213ENST00000472155 SEC61A1P61619 476 aaKnown RBP13.16□□□□□ -0.3
UBXN11-213ENST00000472155 MICBQ29980 383 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 LRRC37A5PQ49AS3 106 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 DBX2Q6ZNG2 339 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
UBXN11-213ENST00000472155 STEAP2Q8NFT2 490 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 ST8SIA4Q92187 359 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 THOC3Q96J01 351 aaKnown RBP13.16□□□□□ -0.3
UBXN11-213ENST00000472155 SGCZQ96LD1 299 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 NAA11Q9BSU3 229 aaPredicted RBP13.16□□□□□ -0.3
UBXN11-213ENST00000472155 TMEM59Q9BXS4 323 aa13.16□□□□□ -0.3
UBXN11-213ENST00000472155 PLATP00750 562 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 JMJD7P0C870 316 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 SP9P0CG40 484 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 GDF1P27539 372 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 AVPR2P30518 371 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 SRD5A2P31213 254 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 RAC3P60763 192 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 HIST1H3AP68431 136 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 FOXO1Q12778 655 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 CAMK2BQ13554 666 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 HIST2H3PS2Q5TEC6 136 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 CDCP2Q5VXM1 449 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 RAB12Q6IQ22 244 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 HIST2H3AQ71DI3 136 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 FAM219AQ8IW50 185 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 SGK3Q96BR1 496 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 RAB3CQ96E17 227 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 DMRTA2Q96SC8 542 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 IFT46Q9NQC8 304 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 PLA2G3Q9NZ20 509 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 H3BUI4 141 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 VAMP5O95183 116 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 SERPINA2P20848 420 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 CTSSP25774 331 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 OTX1P32242 354 aaPredicted RBP13.15□□□□□ -0.3
UBXN11-213ENST00000472155 ZNF133P52736 654 aaPredicted RBP13.15□□□□□ -0.3
UBXN11-213ENST00000472155 SRYQ05066 204 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 CHAF1BQ13112 559 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 HLXQ14774 488 aaPredicted RBP13.15□□□□□ -0.3
UBXN11-213ENST00000472155 ALKAL2Q6UX46 152 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 FAM109AQ8N4B1 249 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 MARCH1Q8TCQ1 289 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 CASTOR1Q8WTX7 329 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 RADILQ96JH8 1075 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 ADGRG7Q96K78 797 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 SLC25A21Q9BQT8 299 aaPredicted RBP13.15□□□□□ -0.3
UBXN11-213ENST00000472155 SPRY4Q9C004 299 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 SLCO5A1Q9H2Y9 848 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 GPR173Q9NS66 373 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 R4GN57 208 aa13.15□□□□□ -0.3
UBXN11-213ENST00000472155 CNOT1A5YKK6 2376 aaKnown RBP13.14□□□□□ -0.31
UBXN11-213ENST00000472155 FCGR2AP12318 317 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 ZNF250P15622 560 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 AKR1C4P17516 323 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 C9orf135Q5VTT2 229 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 PGAP1Q75T13 922 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 ZBTB44Q8NCP5 570 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 ALX4Q9H161 411 aaPredicted RBP13.14□□□□□ -0.31
UBXN11-213ENST00000472155 CDX4O14627 284 aaPredicted RBP13.14□□□□□ -0.31
UBXN11-213ENST00000472155 ANGPTL7O43827 346 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 HIST1H1DP16402 221 aaKnown RBP13.14□□□□□ -0.31
UBXN11-213ENST00000472155 PTGFRP43088 359 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 CYB561P49447 251 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 P2RX3P56373 397 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 BAMBIQ13145 260 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 SSPNQ14714 243 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 TMUB2Q71RG4 321 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 FBXW5Q969U6 566 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 ARL6Q9H0F7 186 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 ELL3Q9HB65 397 aaPredicted RBP13.14□□□□□ -0.31
UBXN11-213ENST00000472155 UBQLN2Q9UHD9 624 aa13.14□□□□□ -0.31
UBXN11-213ENST00000472155 NOP16Q9Y3C1 178 aaKnown RBP13.14□□□□□ -0.31
UBXN11-213ENST00000472155 SDCBPO00560 298 aaPredicted RBP13.13□□□□□ -0.31
UBXN11-213ENST00000472155 DHRS3O75911 302 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 HPP00738 406 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 ERCC1P07992 297 aaPredicted RBP13.13□□□□□ -0.31
UBXN11-213ENST00000472155 CD59P13987 128 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 ZNF32P17041 273 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 H3F3CQ6NXT2 135 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 OR4K15Q8NH41 348 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 LRFN1Q9P244 771 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 V9GYS6 101 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 LINC00862A6NCI5 91 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 DISC1C4P0D8 188 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 ZBTB25P24278 435 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 NPY4RP50391 375 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 FOXG1P55316 489 aaPredicted RBP13.13□□□□□ -0.31
UBXN11-213ENST00000472155 ATXN7L3Q14CW9 347 aaPredicted RBP13.13□□□□□ -0.31
UBXN11-213ENST00000472155 CEACAM16Q2WEN9 425 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 FAM27BQ5VT28 67 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 OR51T1Q8NGJ9 327 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 KCNG3Q8TAE7 436 aa13.13□□□□□ -0.31
UBXN11-213ENST00000472155 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms