RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 SLC39A1Q9NY26 324 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 PSMC3IPQ9P2W1 217 aaPredicted RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 RP1L1Q8IWN7 2480 aaPredicted RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 BAZ1BQ9UIG0 1483 aaKnown RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 PCDH11XQ9BZA7 1347 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 KMT2DO14686 5537 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 LOC102724200A0A096LPH7 203 aaPredicted RBP0.32□□□□□ -2.36
COMMD3-209ENST00000471350 FAM240BA0A1B0GVZ2 78 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 IGLL5B9A064 214 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 NMT2O60551 498 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 CLDN11O75508 207 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 B3GALNT1O75752 331 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 FLOT1O75955 427 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 HPRT1P00492 218 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 SERPINE2P07093 398 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 ANXA5P08758 320 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 CD70P32970 193 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 PRSS3P35030 304 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 PFN2P35080 140 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 AIF1P55008 147 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 ZNF121P58317 390 aaPredicted RBP0.32□□□□□ -2.36
COMMD3-209ENST00000471350 RPS15AP62244 130 aaKnown RBP0.32□□□□□ -2.36
COMMD3-209ENST00000471350 CHIT1Q13231 466 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 LRRC23Q53EV4 343 aaPredicted RBP0.32□□□□□ -2.36
COMMD3-209ENST00000471350 METAP1DQ6UB28 335 aaPredicted RBP0.32□□□□□ -2.36
COMMD3-209ENST00000471350 PDPNQ86YL7 162 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 BHLHE23Q8NDY6 225 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 SYAP1Q96A49 352 aaPredicted RBP0.32□□□□□ -2.36
COMMD3-209ENST00000471350 SNF8Q96H20 258 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 TRIB3Q96RU7 358 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 SFXN3Q9BWM7 321 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 RACGAP1Q9H0H5 632 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 FAM60AQ9NP50 221 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 CLEC4AQ9UMR7 237 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 STARD10Q9Y365 291 aa0.32□□□□□ -2.36
COMMD3-209ENST00000471350 IGKV1OR2-108A0A075B7D4 117 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 IGKV1-6A0A0C4DH72 117 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 A0A0G2JMP0 313 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 A0A0X1KG70 313 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 SMCO2A6NFE2 343 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 AP3B1O00203 1094 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 MTX2O75431 263 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 AQP8O94778 261 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 RAB36O95755 333 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 IGKV1-39P01597 117 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 IGKV1D-39P04432 117 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 EIF2S2P20042 333 aaKnown RBP0.31□□□□□ -2.36
COMMD3-209ENST00000471350 MAGEA3P43357 314 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 KRTAP10-4P60372 401 aaPredicted RBP0.31□□□□□ -2.36
COMMD3-209ENST00000471350 POLR2FP61218 127 aaKnown RBP0.31□□□□□ -2.36
COMMD3-209ENST00000471350 PRB3Q04118 309 aaPredicted RBP0.31□□□□□ -2.36
COMMD3-209ENST00000471350 ST3GAL4Q11206 333 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 MERTKQ12866 999 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 PPP1R7Q15435 360 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 KLHL40Q2TBA0 621 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 SLC25A24Q6NUK1 477 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 TTC23LQ6PF05 361 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 ZNF767PQ75MW2 155 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 TMEM144Q7Z5S9 345 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 IQCKQ8N0W5 287 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 C3orf22Q8N5N4 141 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 ZFP62Q8NB50 900 aaPredicted RBP0.31□□□□□ -2.36
COMMD3-209ENST00000471350 KCNG3Q8TAE7 436 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 NUBPLQ8TB37 319 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 ITLN2Q8WWU7 325 aaPredicted RBP0.31□□□□□ -2.36
COMMD3-209ENST00000471350 CACNG8Q8WXS5 425 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 MRPL48Q96GC5 212 aaKnown RBP0.31□□□□□ -2.36
COMMD3-209ENST00000471350 TEAD3Q99594 435 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 HSPB9Q9BQS6 159 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 ERP44Q9BS26 406 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 MRM3Q9HC36 420 aaKnown RBP0.31□□□□□ -2.36
COMMD3-209ENST00000471350 FAM206AQ9NX38 181 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 DCAF16Q9NXF7 216 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 ICOSQ9Y6W8 199 aa0.31□□□□□ -2.36
COMMD3-209ENST00000471350 LAMB2P55268 1798 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 TMEM72A0PK05 275 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 ERICH4A6NGS2 130 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 SIRPB1O00241 398 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 SCAMP2O15127 329 aaKnown RBP0.3□□□□□ -2.36
COMMD3-209ENST00000471350 CTAG2O75638 210 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 LYNX1P0DP58 116 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 RRM2P31350 389 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 GGT2P36268 569 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 RAB7AP51149 207 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 DOC2AQ14183 400 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 TRAM2Q15035 370 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 CST6Q15828 149 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 HADHQ16836 314 aaKnown RBP0.3□□□□□ -2.36
COMMD3-209ENST00000471350 TMEM176BQ3YBM2 270 aaPredicted RBP0.3□□□□□ -2.36
COMMD3-209ENST00000471350 REEP3Q6NUK4 255 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 OTUD6AQ7L8S5 288 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 CMTM1Q8IZ96 169 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 C2orf73Q8N5S3 287 aaPredicted RBP0.3□□□□□ -2.36
COMMD3-209ENST00000471350 OR1S1Q8NH92 325 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 ZNF563Q8TA94 476 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 RAD51AP1Q96B01 352 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 S100PBPQ96BU1 408 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 Q96MT0 163 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 ALS2CR12Q96Q35 445 aa0.3□□□□□ -2.36
COMMD3-209ENST00000471350 OR51M1Q9H341 326 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms