RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 FAM46BQ96A09 425 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 SPSB4Q96A44 273 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 APOBEC3DQ96AK3 386 aaPredicted RBP15.71■□□□□ 0.11
SMC4-211ENST00000469858 TBCCD1Q9NVR7 557 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 MRPS28Q9Y2Q9 187 aaKnown RBP15.71■□□□□ 0.11
SMC4-211ENST00000469858 PIEZO2Q9H5I5 2752 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 FUOMA2VDF0 154 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 C1QTNF9BB2RNN3 333 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 SERPINA5P05154 406 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 C1QTNF9P0C862 333 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 MNDAP41218 407 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 PMPCAQ10713 525 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 KISS1Q15726 138 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 ZGRF1Q86YA3 2104 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 ZNF101Q8IZC7 436 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 PAQR4Q8N4S7 273 aaPredicted RBP15.71■□□□□ 0.1
SMC4-211ENST00000469858 SLC30A7Q8NEW0 376 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 OR5D18Q8NGL1 313 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 OR52I2Q8NH67 350 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 ZNF75AQ96N20 296 aa15.71■□□□□ 0.1
SMC4-211ENST00000469858 TRAV18A0A075B6X5 111 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 GABARAPH6UMI1 98 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 ALX3O95076 343 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 NGFP01138 241 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 CGAP01215 116 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 VSIG8P0DPA2 414 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 UNC119Q13432 240 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 OR8B8Q15620 311 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 PRR30Q53SZ7 412 aaPredicted RBP15.7■□□□□ 0.1
SMC4-211ENST00000469858 MZT2BQ6NZ67 158 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 GLIPR1L1Q6UWM5 242 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 TOMM5Q8N4H5 51 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 CELF2-AS1Q8N7Q2 184 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 PNLDC1Q8NA58 520 aaKnown RBP15.7■□□□□ 0.1
SMC4-211ENST00000469858 ENKURQ8TC29 256 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 ITFG2Q969R8 447 aa15.7■□□□□ 0.1
SMC4-211ENST00000469858 GMDSO60547 372 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 CELA3BP08861 270 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 RAB6AP20340 208 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 HOXC12P31275 282 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 BCAP31P51572 246 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 MALLQ13021 153 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 GK2Q14410 553 aaPredicted RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 HACD4Q5VWC8 232 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 CXorf67Q86X51 503 aaPredicted RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 CCDC36Q8IYA8 594 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 C15orf40Q8WUR7 153 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 FCAMRQ8WWV6 532 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 PTX4Q96A99 478 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 SNRNP40Q96DI7 357 aaKnown RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 OR51B6Q9H340 312 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 PTTG3PQ9NZH4 202 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 RAB22AQ9UL26 194 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 CRHP06850 196 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 ZNF14P17017 642 aaPredicted RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 TIMP3P35625 211 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 GDNFP39905 211 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 WNT5AP41221 380 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 IDH3GP51553 393 aaPredicted RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 MRPS10P82664 201 aaKnown RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 QRFPP83859 136 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 EIF2S3LQ2VIR3 472 aaKnown RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 CLVS2Q5SYC1 327 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 CRIP3Q6Q6R5 217 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 MRPL21Q7Z2W9 205 aaKnown RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 MYPOPQ86VE0 399 aaPredicted RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 C1orf162Q8NEQ5 155 aaPredicted RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 SLX1AQ9BQ83 275 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 RBFOX1Q9NWB1 397 aaKnown RBP15.69■□□□□ 0.1
SMC4-211ENST00000469858 STARD10Q9Y365 291 aa15.69■□□□□ 0.1
SMC4-211ENST00000469858 MEIOCA2RUB1 952 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 ORC5O43913 435 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 NRASP01111 189 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 KIR2DL3P43628 341 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 HLXQ14774 488 aaPredicted RBP15.68■□□□□ 0.1
SMC4-211ENST00000469858 CNN3Q15417 329 aaKnown RBP15.68■□□□□ 0.1
SMC4-211ENST00000469858 TBC1D28Q2M2D7 210 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 GFRALQ6UXV0 394 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 ACBD4Q8NC06 268 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 REPIN1Q9BWE0 567 aaKnown RBP15.68■□□□□ 0.1
SMC4-211ENST00000469858 MMP28Q9H239 520 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 KLK11Q9UBX7 282 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 CACNG2Q9Y698 323 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 MAP1BP46821 2468 aaKnown RBP15.68■□□□□ 0.1
SMC4-211ENST00000469858 PIEZO1Q92508 2521 aa15.68■□□□□ 0.1
SMC4-211ENST00000469858 ZNF816-ZNF321PA0A0X1KG74 233 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 PRRG2O14669 202 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 TPPPO94811 219 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 GPR176Q14439 515 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 MOGAT2Q3SYC2 334 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 TMEM42Q69YG0 159 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 GLCCI1Q86VQ1 547 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 OR56B2PQ8NGI1 322 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 PIGCQ92535 297 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 SPSB1Q96BD6 273 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 C1orf147Q96MC9 270 aaPredicted RBP15.67■□□□□ 0.1
SMC4-211ENST00000469858 POFUT1Q9H488 388 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 ASF1BQ9NVP2 202 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 FAM240BA0A1B0GVZ2 78 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 FAM230AA0A1W2PPH8 454 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms