RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 IGLV3-21P80748 117 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 SRSF1Q07955 248 aaKnown RBP eCLIP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 SGCAQ16586 387 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 EIF2S3LQ2VIR3 472 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 TMEM128Q5BJH2 165 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 BTNL8Q6UX41 500 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 CLEC18BQ6UXF7 455 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 TRAPPC6BQ86SZ2 158 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 SHISA5Q8N114 240 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 ZFP82Q8N141 532 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 CSNK1A1LQ8N752 337 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 CLEC18CQ8NCF0 446 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 FAM46BQ96A09 425 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 MICU1Q9BPX6 476 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 TMEM231Q9H6L2 316 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 FBLN5Q9UBX5 448 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 CGGBP1Q9UFW8 167 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 TINAGQ9UJW2 476 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 MRPS33Q9Y291 106 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 KPTNQ9Y664 436 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 C13orf42A0A1B0GVH6 325 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 FITM1A5D6W6 292 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 WIPF3A6NGB9 483 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 FAM157AC9JC47 383 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 H3BSH0 61 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 SMAD9O15198 467 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 TOX3O15405 576 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 SRSF10O75494 262 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 CSN2P05814 226 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 S100A6P06703 90 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF44P15621 663 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 DNASE1L1P49184 302 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 DVL1P1P54792 670 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 TLE1Q04724 770 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 SKP2Q13309 424 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 OR10K2Q6IF99 312 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF585AQ6P3V2 769 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 TIPARPQ7Z3E1 657 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF761Q86XN6 746 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 ADAD2Q8NCV1 583 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 CASTOR1Q8WTX7 329 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 ADAM19Q9H013 955 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 ZMAT3Q9HA38 289 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 PARP11Q9NR21 331 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 SLC22A11Q9NSA0 550 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 VSX1Q9NZR4 365 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 DTX4Q9Y2E6 619 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 LOC101059948A0A1B0GTJ6 334 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 XKRYO14609 159 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 FARS2O95363 451 aaKnown RBP8.49□□□□□ -1.05
HDAC3-205ENST00000469550 IFNA6P05013 189 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 PET100P0DJ07 73 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 AKR1C4P17516 323 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 HSD11B1P28845 292 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 SULT1A2P50226 295 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 FOXK1P85037 733 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 MFGE8Q08431 387 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-205ENST00000469550 FUT7Q11130 342 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 FAM76BQ5HYJ3 339 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 VAX1Q5SQQ9 334 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF704Q6ZNC4 412 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-205ENST00000469550 SLC16A13Q7RTY0 426 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 MDGA2Q7Z553 956 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 NAA40Q86UY6 237 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 JAGN1Q8N5M9 183 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 LYPD6BQ8NI32 183 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 HIST1H2BAQ96A08 127 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF775Q96BV0 537 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-205ENST00000469550 KTI12Q96EK9 354 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-205ENST00000469550 SLC5A7Q9GZV3 580 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 HRH4Q9H3N8 390 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 NIT2Q9NQR4 276 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 UBQLN4Q9NRR5 601 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 MRPL22Q9NWU5 206 aaKnown RBP8.49□□□□□ -1.05
HDAC3-205ENST00000469550 CACFD1Q9UGQ2 172 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 ANAPC10Q9UM13 185 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 GTF2A1LQ9UNN4 478 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 FAM96BQ9Y3D0 163 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 R4GMQ9 66 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 PTPN13Q12923 2485 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 MAST4O15021 2626 aa8.49□□□□□ -1.05
HDAC3-205ENST00000469550 BSNQ9UPA5 3926 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 IGLV1-36A0A0B4J1U3 117 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 TRAV20A0A0B4J274 112 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 PRSS37A4D1T9 235 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 C2orf74A8MZ97 194 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF264O43296 627 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ICOSLGO75144 302 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 OR6A2O95222 327 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 SFT2D2O95562 160 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 BPNT1O95861 308 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 GPANK1O95872 356 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 CSTBP04080 98 aaKnown RBP8.48□□□□□ -1.05
HDAC3-205ENST00000469550 HRH1P35367 487 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 F2RL1P55085 397 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 QRFPP83859 136 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 HGFACQ04756 655 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 IL15RAQ13261 267 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ACTBL2Q562R1 376 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 C5orf46Q6UWT4 87 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms