RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 EFNB2P52799 333 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 UBE2NP61088 152 aaKnown RBP8.13□□□□□ -1.11
SMC1A-205ENST00000469129 RAB1AP62820 205 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 ARL6IP1Q15041 203 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 GUSBP1Q15486 140 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 GSG1Q2KHT4 349 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 CLVS2Q5SYC1 327 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 NSUN5P2Q63ZY6 315 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 GLIPR1L1Q6UWM5 242 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 PLXDC2Q6UX71 529 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 DNM1P46Q6ZS02 220 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 Q6ZT83 130 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 LHFPL2Q6ZUX7 228 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 NAA40Q86UY6 237 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 SPACA3Q8IXA5 215 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 STEAP2Q8NFT2 490 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 OR2AE1Q8NHA4 323 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 SSC4DQ8WTU2 575 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 SGK3Q96BR1 496 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 NEURL2Q9BR09 285 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 MARVELD1Q9BSK0 173 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 TMEM59Q9BXS4 323 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 ACTR6Q9GZN1 396 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 MMP28Q9H239 520 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 KCNK15Q9H427 330 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 ZNF224Q9NZL3 707 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 MTFP1Q9UDX5 166 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 ZNF107Q9UII5 783 aaPredicted RBP8.13□□□□□ -1.11
SMC1A-205ENST00000469129 ACACAQ13085 2346 aa8.13□□□□□ -1.11
SMC1A-205ENST00000469129 GTF3C1Q12789 2109 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 MBD3L4A6NDZ8 208 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 MBD3L3A6NE82 208 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 MBD3L5A6NJ08 208 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 E9PLN8 166 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 KDM4BO94953 1096 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 IL18BPO95998 194 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 HLA-HP01893 362 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 HOXD4P09016 255 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 VSIG8P0DPA2 414 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 COX5AP20674 150 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 HLA-DMAP28067 261 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 SRP9P49458 86 aaKnown RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 RAG2P55895 527 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 TMPRSS3P57727 454 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 HGFACQ04756 655 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 PLA2G7Q13093 441 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 MRPL49Q13405 166 aaKnown RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 SNTB2Q13425 540 aaKnown RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 KISS1Q15726 138 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 TBC1D28Q2M2D7 210 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 PCGF3Q3KNV8 242 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 TBRG1Q3YBR2 411 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 PLA1AQ53H76 456 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 KRTCAP3Q53RY4 240 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 COLCA1Q6ZS62 124 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 MRPL21Q7Z2W9 205 aaKnown RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 ANGPTL5Q86XS5 388 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 CPEB3Q8NE35 698 aaKnown RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 CSNK2A3Q8NEV1 391 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 OR56B1Q8NGI3 324 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 OR5L1Q8NGL2 311 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 MBD3L2Q8NHZ7 208 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 FGFBP3Q8TAT2 258 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 BCL2L2Q92843 193 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 UPRTQ96BW1 309 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 BORCS8Q96FH0 119 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 GPR137Q96N19 417 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 TAAR6Q96RI8 345 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 SOX7Q9BT81 388 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 MOV10Q9HCE1 1003 aaKnown RBP8.12□□□□□ -1.11
SMC1A-205ENST00000469129 LHX6Q9UPM6 363 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 SLC7A11Q9UPY5 501 aa8.12□□□□□ -1.11
SMC1A-205ENST00000469129 DMXL2Q8TDJ6 3036 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 KMT2BQ9UMN6 2715 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-205ENST00000469129 IGKV1-9A0A0C4DH69 117 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 C5orf49A4QMS7 147 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 C5orf63A6NC05 138 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 K7ENP7 123 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 CDC14BO60729 498 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 ZNF780AO75290 641 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-205ENST00000469129 CRTAPO75718 401 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-205ENST00000469129 NRASP01111 189 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 MT-ND4P03905 459 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 TCRBP04435 133 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 GSTP1P09211 210 aaKnown RBP8.11□□□□□ -1.11
SMC1A-205ENST00000469129 AKAIN1P0CW23 69 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 EDN3P14138 238 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 ANOS1P23352 680 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 BTCP35070 178 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 RCVRNP35243 200 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 OR3A4PP47883 348 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 RBP2P50120 134 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 ATP1B3P54709 279 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 PER3P56645 1201 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 TAS2R19P59542 299 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 QRFPP83859 136 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 FAM3AP98173 230 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 UNC119Q13432 240 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 TATDN3Q17R31 274 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms