RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PPP1CBP62140 327 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 RPS15AP62244 130 aaKnown RBP3.1□□□□□ -1.91
LSM5-209ENST00000468872 ARG2P78540 354 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 CDH17Q12864 832 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 EBI3Q14213 229 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 TPTE2P1Q5T6R2 138 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 PIP5KL1Q5T9C9 394 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 ZNF691Q5VV52 312 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 PRSS58Q8IYP2 241 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 METTL13Q8N6R0 699 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 GLYATL2Q8WU03 294 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 ZNF317Q96PQ6 595 aaPredicted RBP3.1□□□□□ -1.91
LSM5-209ENST00000468872 BCL7BQ9BQE9 202 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 SPNS1Q9H2V7 528 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 CLN6Q9NWW5 311 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 MTFP1Q9UDX5 166 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 TRMT112Q9UI30 125 aaKnown RBP3.1□□□□□ -1.91
LSM5-209ENST00000468872 ZNF222Q9UK12 451 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 MROH7-TTC4A0A0A0MT08 1334 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 GAKO14976 1311 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 LRRC37A2A6NM11 1700 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 DENND4AQ7Z401 1863 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 IGLV1-50A0A075B6I6 118 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 A0A1B0GTQ1 180 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 A0A1W2PP18 115 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 ERICH4A6NGS2 130 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 OXTP01178 125 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 ERGP11308 486 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 TCN2P20062 427 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 TUBG1P23258 451 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 CLDN8P56748 225 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 VSX2P58304 361 aaPredicted RBP3.09□□□□□ -1.91
LSM5-209ENST00000468872 UBE2NP61088 152 aaKnown RBP3.09□□□□□ -1.91
LSM5-209ENST00000468872 ESRRGP62508 458 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 SPAG1Q07617 926 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 SYCNQ0VAF6 134 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 SLAQ13239 276 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 TMED1Q13445 227 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 UBE2SQ16763 222 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 TRMT5Q32P41 509 aaKnown RBP3.09□□□□□ -1.91
LSM5-209ENST00000468872 ORMDL2Q53FV1 153 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 BEX5Q5H9J7 111 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 TMEM205Q6UW68 189 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 USP50Q70EL3 339 aaPredicted RBP3.09□□□□□ -1.91
LSM5-209ENST00000468872 ABHD12BQ7Z5M8 362 aaPredicted RBP3.09□□□□□ -1.91
LSM5-209ENST00000468872 MRPL55Q7Z7F7 128 aaKnown RBP3.09□□□□□ -1.91
LSM5-209ENST00000468872 FAM71AQ8IYT1 594 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 C11orf72Q8NBR9 251 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 OR51E1Q8TCB6 317 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 PDXPQ96GD0 296 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 FOXC2Q99958 501 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 LZTS2Q9BRK4 669 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 PIGUQ9H490 435 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 EDA2RQ9HAV5 297 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 PATZ1Q9HBE1 687 aaKnown RBP3.09□□□□□ -1.91
LSM5-209ENST00000468872 ZDHHC4Q9NPG8 344 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 PXMP2Q9NR77 195 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 TUBG2Q9NRH3 451 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 CTSFQ9UBX1 484 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 C4BP0C0L5 1744 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 TJP1Q07157 1748 aa3.09□□□□□ -1.91
LSM5-209ENST00000468872 CPDO75976 1380 aa3.09□□□□□ -1.92
LSM5-209ENST00000468872 UBR3Q6ZT12 1888 aa3.09□□□□□ -1.92
LSM5-209ENST00000468872 PPIP5K1Q6PFW1 1433 aa3.09□□□□□ -1.92
LSM5-209ENST00000468872 CREBBPQ92793 2442 aa3.09□□□□□ -1.92
LSM5-209ENST00000468872 MRC1P22897 1456 aa3.09□□□□□ -1.92
LSM5-209ENST00000468872 TET2Q6N021 2002 aaPredicted RBP3.09□□□□□ -1.92
LSM5-209ENST00000468872 PIKFYVEQ9Y2I7 2098 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 SSC5DA1L4H1 1573 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 LTN1O94822 1766 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 IGF2RP11717 2491 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 TSPAN11A1L157 253 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 H7C1H1 209 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 RALBP11234 206 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 ZNF32P17041 273 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 RAB3AP20336 220 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 RAB4AP20338 218 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 SSTR5P35346 364 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 RFC3P40938 356 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 HCAR3P49019 387 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 P2RX1P51575 399 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 RAD51Q06609 339 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 NCF4Q15080 339 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 IRF4Q15306 451 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 KHDRBS2Q5VWX1 349 aaKnown RBP3.08□□□□□ -1.92
LSM5-209ENST00000468872 NTM-AS1Q6ZSK4 140 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 APRG1Q8IVJ8 170 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 RIMKLAQ8IXN7 391 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 ARRDC1Q8N5I2 433 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 LRRC75AQ8NAA5 344 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 OR52K1Q8NGK4 314 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 PIFOQ8TCI5 191 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 GPX8Q8TED1 209 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 C15orf40Q8WUR7 153 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 NRBF2Q96F24 287 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 JSRP1Q96MG2 331 aaPredicted RBP3.08□□□□□ -1.92
LSM5-209ENST00000468872 OPALINQ96PE5 141 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 MRM3Q9HC36 420 aaKnown RBP3.08□□□□□ -1.92
LSM5-209ENST00000468872 SAR1BQ9Y6B6 198 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 MROH5Q6ZUA9 1318 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms