RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 OR1M1Q8NGA1 313 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 ST8SIA4Q92187 359 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 RHBDD3Q9Y3P4 386 aa18.07■□□□□ 0.48
TTC28-204ENST00000468807 CLDN34H7C241 214 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 P2RY10O00398 339 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 DVL1O14640 695 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 HMGN1P05114 100 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 LIPFP07098 398 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 GMFBP60983 142 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 CBX1P83916 185 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 MICBQ29980 383 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 BTN2A1Q7KYR7 527 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 FTMTQ8N4E7 242 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 CSNK2A3Q8NEV1 391 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 OTOSQ8NHW6 89 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 MICU1Q9BPX6 476 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 ZNF747Q9BV97 191 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 YY1AP1Q9H869 796 aa18.06■□□□□ 0.48
TTC28-204ENST00000468807 ANXA2P2A6NMY6 339 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 TNFRSF13BO14836 293 aaPredicted RBP18.05■□□□□ 0.48
TTC28-204ENST00000468807 TIPRLO75663 272 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 LHBP01229 141 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 DNAL1Q4LDG9 190 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 TEX36Q5VZQ5 186 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 TMEM236Q5W0B7 351 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 KCTD8Q6ZWB6 473 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 RHOUQ7L0Q8 258 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 TRPM8Q7Z2W7 1104 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 C11orf53Q8IXP5 236 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 ZNF454Q8N9F8 522 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 BBS1Q8NFJ9 593 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 WDFY2Q96P53 400 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 CCL13Q99616 98 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 TEX12Q9BXU0 123 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 RGCCQ9H4X1 137 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 UNKLQ9H9P5 680 aaKnown RBP18.05■□□□□ 0.48
TTC28-204ENST00000468807 RNPEPL1Q9HAU8 725 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 PKD1L1Q8TDX9 2849 aa18.05■□□□□ 0.48
TTC28-204ENST00000468807 MGAM2Q2M2H8 2515 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 TRRAPQ9Y4A5 3859 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 CDIPTO14735 213 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 PRODHO43272 600 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 FKBP6O75344 327 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 ANXA8P13928 327 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 HOXB6P17509 224 aaKnown RBP18.04■□□□□ 0.48
TTC28-204ENST00000468807 ARF6P62330 175 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 ELF3P78545 371 aaPredicted RBP18.04■□□□□ 0.48
TTC28-204ENST00000468807 CDK5Q00535 292 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 IL5RAQ01344 420 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 SNCBQ16143 134 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 WDR38Q5JTN6 314 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 SHISA2Q6UWI4 295 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 WDR82Q6UXN9 313 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 GATAD2BQ8WXI9 593 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 LHX4Q969G2 390 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 TBX15Q96SF7 602 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 RTL8AQ9BWD3 113 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 LAMP5Q9UJQ1 280 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 KLHDC2Q9Y2U9 406 aa18.04■□□□□ 0.48
TTC28-204ENST00000468807 A0A1B0GW55 424 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 ZNF850A8MQ14 1090 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DUX4L2P0CJ85 424 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DUX4L3P0CJ86 424 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DUX4L4P0CJ87 422 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DUX4L5P0CJ88 424 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DUX4L6P0CJ89 424 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DUX4L7P0CJ90 424 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 MMP9P14780 707 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 MUC1P15941 1255 aaPredicted RBP18.03■□□□□ 0.48
TTC28-204ENST00000468807 OMGP23515 440 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 BPIFB3P59826 476 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 IL13RA1P78552 427 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 PRDX4Q13162 271 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 C16orf87Q6PH81 154 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DUX4L9Q6RFH8 374 aaPredicted RBP18.03■□□□□ 0.48
TTC28-204ENST00000468807 KRT77Q7Z794 578 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 FGFRL1Q8N441 504 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 PIGCQ92535 297 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 SEH1LQ96EE3 360 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DNAJB9Q9UBS3 223 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 DUX4Q9UBX2 424 aa18.03■□□□□ 0.48
TTC28-204ENST00000468807 CENPVL3A0A0U1RRI6 287 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 SRRM5B3KS81 715 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 FCN3O75636 299 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 ECDO95905 644 aaPredicted RBP18.02■□□□□ 0.48
TTC28-204ENST00000468807 ACKR3P25106 362 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 HCCSP53701 268 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 PSMA6P60900 246 aaKnown RBP18.02■□□□□ 0.48
TTC28-204ENST00000468807 IKZF1Q13422 519 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 APOFQ13790 326 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 SLC35D3Q5M8T2 416 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 PDZD9Q8IXQ8 264 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 GALNT4Q8N4A0 578 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 FAM216BQ8N7L0 139 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 FAM81AQ8TBF8 368 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 BCAS4Q8TDM0 211 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 TMIGD2Q96BF3 282 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 ITPKCQ96DU7 683 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 TVP23BQ9NYZ1 205 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 ONECUT1Q9UBC0 465 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms