RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FAM98BQ52LJ0 330 aaKnown RBP20.21■□□□□ 0.83
PTCH1-210ENST00000468211 TMEM179BQ7Z7N9 219 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 TIGD4Q8IY51 512 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 ARHGAP24Q8N264 748 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 KIR3DL3Q8N743 410 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 GATAD2BQ8WXI9 593 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 ST8SIA4Q92187 359 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 RNPEPL1Q9HAU8 725 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 ACOXLQ9NUZ1 547 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 C1RLQ9NZP8 487 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 RPUSD1Q9UJJ7 312 aaKnown RBP20.21■□□□□ 0.83
PTCH1-210ENST00000468211 GLCEO94923 617 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 T-ENOLP0DO92 83 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 AMY2BP19961 511 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 GRK5P34947 590 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 WDR38Q5JTN6 314 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 TREML4Q6UXN2 200 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 PDZD9Q8IXQ8 264 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 TEX47Q8TBZ9 253 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 GIPC3Q8TF64 312 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 CLPTM1LQ96KA5 538 aa20.2■□□□□ 0.82
PTCH1-210ENST00000468211 H3BN98 237 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 RAG2P55895 527 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 PDCD1Q15116 288 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 FAM216BQ8N7L0 139 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 OR52H1Q8NGJ2 320 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 WFDC12Q8WWY7 111 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 FAM71F1Q96KD3 344 aaPredicted RBP20.19■□□□□ 0.82
PTCH1-210ENST00000468211 PAPOLGQ9BWT3 736 aaKnown RBP20.19■□□□□ 0.82
PTCH1-210ENST00000468211 OR51V1Q9H2C8 321 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 TAS2R1Q9NYW7 299 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 KIF17Q9P2E2 1029 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 VWFP04275 2813 aa20.19■□□□□ 0.82
PTCH1-210ENST00000468211 A0A0U1RQK1 487 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 ACOT8O14734 319 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 CDIPTO14735 213 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 SELENOFO60613 162 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 ECDO95905 644 aaPredicted RBP20.18■□□□□ 0.82
PTCH1-210ENST00000468211 MUC1P15941 1255 aaPredicted RBP20.18■□□□□ 0.82
PTCH1-210ENST00000468211 ACKR3P25106 362 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 MICBQ29980 383 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 ADGRG5Q8IZF4 528 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 PIP4P2Q8N4L2 257 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 TMEM86BQ8N661 226 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 CCDC124Q96CT7 223 aaKnown RBP20.18■□□□□ 0.82
PTCH1-210ENST00000468211 ITPKCQ96DU7 683 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 PGAM5Q96HS1 289 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 CCT8L2Q96SF2 557 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 CHID1Q9BWS9 393 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 FGF23Q9GZV9 251 aaPredicted RBP20.18■□□□□ 0.82
PTCH1-210ENST00000468211 TLNRD1Q9H1K6 362 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 OR10A2Q9H208 303 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 CNTD2Q9H8S5 307 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 KLHDC2Q9Y2U9 406 aa20.18■□□□□ 0.82
PTCH1-210ENST00000468211 WNK1Q9H4A3 2382 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 IGHV4-59P01825 116 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 APOC1P02654 83 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 TFF1P04155 84 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 H2BFMP0C1H6 154 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 RAP2AP10114 183 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 PRB3Q04118 309 aaPredicted RBP20.17■□□□□ 0.82
PTCH1-210ENST00000468211 PLBD1Q6P4A8 553 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 SHFQ7M4L6 423 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 VMO1Q7Z5L0 202 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 LY6G5BQ8NDX9 201 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 OR5T2Q8NGG2 359 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 OR4F5Q8NH21 305 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 SSMEM1Q8WWF3 244 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 WDR13Q9H1Z4 485 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 SP140LQ9H930 580 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 BEX1Q9HBH7 125 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 POMT1Q9Y6A1 747 aa20.17■□□□□ 0.82
PTCH1-210ENST00000468211 NDUFA7O95182 113 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 CST1P01037 141 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 KNG1P01042 644 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 CRYBA1P05813 215 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 SELLP14151 372 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 POU1F1P28069 291 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 DLX1P56177 255 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 KRTAP10-3P60369 221 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 GMFBP60983 142 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 GINS1Q14691 196 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 C11orf91Q3C1V1 193 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 CDONQ4KMG0 1287 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 RHOUQ7L0Q8 258 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 GALNT4Q8N4A0 578 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 CSNK2A3Q8NEV1 391 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 OTOSQ8NHW6 89 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 ASB9Q96DX5 294 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 LYZL4Q96KX0 146 aa20.16■□□□□ 0.82
PTCH1-210ENST00000468211 PDP1Q9P0J1 537 aaPredicted RBP20.16■□□□□ 0.82
PTCH1-210ENST00000468211 TIPRLO75663 272 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 CALB2P22676 271 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 CFL1P23528 166 aaKnown RBP20.15■□□□□ 0.82
PTCH1-210ENST00000468211 GNALP38405 381 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 PRDX4Q13162 271 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 OLFML2AQ68BL7 652 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 HS3ST5Q8IZT8 346 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 THEM6Q8WUY1 208 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 RPL3LQ92901 407 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms