RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 DRAXINQ8NBI3 349 aaPredicted RBP8.87□□□□□ -0.99
MSH5-213ENST00000468136 OR4D6Q8NGJ1 314 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 MBD3L2Q8NHZ7 208 aaPredicted RBP8.87□□□□□ -0.99
MSH5-213ENST00000468136 MS4A3Q96HJ5 214 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 MED30Q96HR3 178 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 GPR137Q96N19 417 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 NEDD4LQ96PU5 975 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 TRIB1Q96RU8 372 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
MSH5-213ENST00000468136 TRAF4Q9BUZ4 470 aaPredicted RBP8.87□□□□□ -0.99
MSH5-213ENST00000468136 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
MSH5-213ENST00000468136 TMEM59Q9BXS4 323 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 CACNG6Q9BXT2 260 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.87□□□□□ -0.99
MSH5-213ENST00000468136 PLSCR4Q9NRQ2 329 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 NLKQ9UBE8 527 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 CSAG2Q9Y5P2 127 aa8.87□□□□□ -0.99
MSH5-213ENST00000468136 A6NIN4 97 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 K7ENP7 123 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 AKR7A2O43488 359 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 LANCL1O43813 399 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 KDM4BO94953 1096 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 IL18BPO95998 194 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 CST4P01036 141 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 NRASP01111 189 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 TCRBP04435 133 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 ADRB1P08588 477 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 DBHP09172 617 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 VSIG8P0DPA2 414 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 CD79AP11912 226 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 PSMB1P20618 241 aaKnown RBP8.86□□□□□ -0.99
MSH5-213ENST00000468136 COX5AP20674 150 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 CPT2P23786 658 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 HOXC12P31275 282 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 TIMP3P35625 211 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 RBP2P50120 134 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 FAM3AP98173 230 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 MEF2DQ14814 521 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 TATDN3Q17R31 274 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 TBC1D28Q2M2D7 210 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 SNAI3Q3KNW1 292 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 ACTBL2Q562R1 376 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 FAM180AQ6UWF9 173 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 CELF2-AS1Q8N7Q2 184 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 PXT1Q8NFP0 134 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 OR10R2Q8NGX6 335 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 SNRNP27Q8WVK2 155 aaKnown RBP8.86□□□□□ -0.99
MSH5-213ENST00000468136 AQP3Q92482 292 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 BORCS8Q96FH0 119 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 POM121L2Q96KW2 1035 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 SCNM1Q9BWG6 230 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 TM2D1Q9BX74 207 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 METTL9Q9H1A3 318 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 HRASLSQ9HDD0 168 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 B3GNT2Q9NY97 397 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 IL36GQ9NZH8 169 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 EIF3KQ9UBQ5 218 aaKnown RBP8.86□□□□□ -0.99
MSH5-213ENST00000468136 TUBD1Q9UJT1 453 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 ZNF407Q9C0G0 2248 aa8.86□□□□□ -0.99
MSH5-213ENST00000468136 IGKV1-9A0A0C4DH69 117 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 C7orf66A4D0T2 115 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 SERPINE3A8MV23 424 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 RAB27BO00194 218 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 GMDSO60547 372 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 LMX1BO60663 402 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 CDC14BO60729 498 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 CCNKO75909 580 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 SNAPC5O75971 98 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 CYB5AP00167 134 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 IGHV3-9P01782 118 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 H2AFB2P0C5Z0 115 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 SELEP16581 610 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 FAHP16930 419 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 MPZP25189 248 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 EFNB2P52799 333 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 RBMS2Q15434 407 aaKnown RBP8.85□□□□□ -0.99
MSH5-213ENST00000468136 UBE2V2Q15819 145 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 C3AR1Q16581 482 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 PCGF3Q3KNV8 242 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 C3orf36Q3SXR2 165 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 TBRG1Q3YBR2 411 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 ZNF260Q3ZCT1 412 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 SFRP5Q5T4F7 317 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 ASCL4Q6XD76 172 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 BEND4Q6ZU67 534 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 MRPL21Q7Z2W9 205 aaKnown RBP8.85□□□□□ -0.99
MSH5-213ENST00000468136 NAA40Q86UY6 237 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 SPACA3Q8IXA5 215 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 IZUMO1Q8IYV9 350 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 SAXO1Q8IYX7 474 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 PAQR4Q8N4S7 273 aaPredicted RBP8.85□□□□□ -0.99
MSH5-213ENST00000468136 FAM89BQ8N5H3 189 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 RBMXL3Q8N7X1 1067 aaKnown RBP8.85□□□□□ -0.99
MSH5-213ENST00000468136 CPEB3Q8NE35 698 aaKnown RBP8.85□□□□□ -0.99
MSH5-213ENST00000468136 SLC7A6Q92536 515 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 SLC25A21Q9BQT8 299 aaPredicted RBP8.85□□□□□ -0.99
MSH5-213ENST00000468136 MMP28Q9H239 520 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 RHOFQ9HBH0 211 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 PRSS50Q9UI38 385 aa8.85□□□□□ -0.99
MSH5-213ENST00000468136 SCP2D1Q9UJQ7 156 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms