RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, human

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC16A-208	ENST00000467838	EIF5AL1	Q6IS14	154 aa	Known RBP	12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	OGFOD3	Q6PK18	319 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	NOXO1	Q8NFA2	376 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	OR8B12	Q8NGG6	310 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	WNT2B	Q93097	391 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	TMEM41A	Q96HV5	264 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	OR10C1	Q96KK4	312 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	C12orf57	Q99622	126 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	PMS2P1	A4D2B8	440 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	FAM157A	C9JC47	383 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	ZNF354A	O60765	605 aa	Predicted RBP	12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	F12	P00748	615 aa	Predicted RBP	12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	RPL35	P42766	123 aa	Known RBP	12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	SULT1A2	P50226	295 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	RNF4	P78317	190 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	FOXF1	Q12946	379 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	RAB32	Q13637	225 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	KCNMB1	Q16558	191 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	BTNL8	Q6UX41	500 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	D2HGDH	Q8N465	521 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	OR51F2	Q8NH61	342 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	ARHGAP5-AS1	Q96IT6	56 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	C5orf34	Q96MH7	638 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	TMEM231	Q9H6L2	316 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	IFT22	Q9H7X7	185 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	PNRC2	Q9NPJ4	139 aa	Known RBP	12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	SLC2A4RG	Q9NR83	387 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	SEMA5B	Q9P283	1151 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	SUSD2	Q9UGT4	822 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838	ADAMTS20	P59510	1910 aa		12.81	□□□□□ -0.36
SEC16A-208	ENST00000467838		A0A1B0GX78	115 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838		A0A1W2PR77	199 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	CA11	O75493	328 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	GAPDH	P04406	335 aa	Known RBP	12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	FCGR3A	P08637	254 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	PGA4	P0DJD7	388 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	PGA3	P0DJD8	388 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	AMY2B	P19961	511 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	LPAR6	P43657	344 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	P2RY4	P51582	365 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	C14orf28	Q4W4Y0	310 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	LANCL3	Q6ZV70	420 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	LYPD6B	Q8NI32	183 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	RXFP4	Q8TDU9	374 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	EMG1	Q92979	244 aa	Known RBP	12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	RELT	Q969Z4	430 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	NECAB3	Q96P71	396 aa	Predicted RBP	12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	OR5B2	Q96R09	309 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	MICU1	Q9BPX6	476 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	URM1	Q9BTM9	101 aa	Known RBP	12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	EGLN1	Q9GZT9	426 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	ZNF768	Q9H5H4	540 aa	Known RBP	12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	SEC61A2	Q9H9S3	476 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	PARP11	Q9NR21	331 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	GHRL	Q9UBU3	117 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	FBXO24	O75426	580 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	CRYBA1	P05813	215 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	SPP1	P10451	314 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	PRF1	P14222	555 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	AKR1D1	P51857	326 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	PDZK1IP1	Q13113	114 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	SLC25A47	Q6Q0C1	308 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	CRIP3	Q6Q6R5	217 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	DOK3	Q7L591	496 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	SPACA5	Q96QH8	159 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	GPR84	Q9NQS5	396 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	FBXO9	Q9UK97	447 aa	Predicted RBP	12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	MEMO1	Q9Y316	297 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	FAM96B	Q9Y3D0	163 aa		12.8	□□□□□ -0.36
SEC16A-208	ENST00000467838	IGLV3-32	A0A0A0MS00	114 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	VSTM2B	A6NLU5	285 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	RNASEK-C17orf49	H0YIS7	233 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	TRAF3IP2	O43734	574 aa	Predicted RBP	12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	IGLV3-1	P01715	115 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	SFTA3	P0C7M3	94 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	HKR1	P10072	659 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	MEOX2	P50222	304 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	FBXW4	P57775	412 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	ZNF121	P58317	390 aa	Predicted RBP	12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	MRGPRX4	Q96LA9	322 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	USB1	Q9BQ65	265 aa	Known RBP	12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	SOX7	Q9BT81	388 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	EMC6	Q9BV81	110 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	OR10A2	Q9H208	303 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	BANF2	Q9H503	90 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	ZNF319	Q9P2F9	582 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	ASH2L	Q9UBL3	628 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	ATPIF1	Q9UII2	106 aa		12.79	□□□□□ -0.36
SEC16A-208	ENST00000467838	IGKV1-9	A0A0C4DH69	117 aa		12.78	□□□□□ -0.36
SEC16A-208	ENST00000467838		A0A1W2PP11	408 aa		12.78	□□□□□ -0.36
SEC16A-208	ENST00000467838	COLCA2	A8K830	154 aa		12.78	□□□□□ -0.36
SEC16A-208	ENST00000467838	LMO7DN	F2Z398	122 aa		12.78	□□□□□ -0.36
SEC16A-208	ENST00000467838	LRP3	O75074	770 aa		12.78	□□□□□ -0.36
SEC16A-208	ENST00000467838	IGHG1	P01857	330 aa		12.78	□□□□□ -0.36
SEC16A-208	ENST00000467838	NAT2	P11245	290 aa		12.78	□□□□□ -0.36
SEC16A-208	ENST00000467838	ZNF708	P17019	499 aa		12.78	□□□□□ -0.36
SEC16A-208	ENST00000467838	RPL7L1	Q6DKI1	246 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms