RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 HDHD2Q9H0R4 259 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SPACA1Q9HBV2 294 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 CHMP1AQ9HD42 196 aaPredicted RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 OBP2BQ9NPH6 170 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 AMDHD2Q9Y303 409 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 LSM2Q9Y333 95 aaKnown RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 GRIP1Q9Y3R0 1128 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 FASNP49327 2511 aaKnown RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 OR6C6A6NF89 314 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 MFSD2BA6NFX1 497 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 METTL15A6NJ78 407 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 F5H5K5 113 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SLC22A5O76082 557 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 RPP14O95059 124 aaKnown RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 IGHV2-70P01814 119 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 BMP4P12644 408 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 CCL2P13500 99 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 PLA2G2AP14555 144 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 ZNF14P17017 642 aaPredicted RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 HSD11B1P28845 292 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SERPINB10P48595 397 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 IDH3GP51553 393 aaPredicted RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 PLP2Q04941 152 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 TAF13Q15543 124 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 TMPRSS11AQ6ZMR5 421 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 FAM220AQ7Z4H9 259 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 DMRTC2Q8IXT2 367 aaPredicted RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 PRR18Q8N4B5 295 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 OR1F12Q8NHA8 337 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 HSD17B8Q92506 261 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 MUCL1Q96DR8 90 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 PELI1Q96FA3 418 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 LRRC46Q96FV0 321 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 NEU1Q99519 415 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 LOC100509620A0A075B734 347 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 A0A1B0GV90 55 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 IQCMA0A1B0GVH7 501 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 L7N2F9 121 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SLC31A2O15432 143 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 MT-ND5P03915 603 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SERPINA5P05154 406 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 CCNOP22674 350 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 CRYGSP22914 178 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 STOMP27105 288 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 G0S2P27469 103 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 OTX1P32242 354 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 PSMB10P40306 273 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 PRKXP51817 358 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SRSF1Q07955 248 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 TNK1Q13470 666 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SPHARQ15513 63 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 RSPO1Q2MKA7 263 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 ARMCX4Q5H9R4 360 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 C11orf88Q6PI97 169 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 DEGS2Q6QHC5 323 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SSX9Q7RTT3 188 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 KLBQ86Z14 1044 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 OR6Q1Q8NGQ2 317 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 DACH2Q96NX9 599 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 WFIKKN1Q96NZ8 548 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 VRK1Q99986 396 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 MED18Q9BUE0 208 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SLC22A4Q9H015 551 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 BIN3Q9NQY0 253 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 USP9YO00507 2555 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 DOPEY2Q9Y3R5 2298 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 PNMA8CA0A1B0GUJ8 204 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 C5orf49A4QMS7 147 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 E9PI62 339 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 M0R135 149 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 THBDP07204 575 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 TACSTD2P09758 323 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SPNP16150 400 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 CBR1P16152 277 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 JUNBP17275 347 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 ANOS1P23352 680 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SLC6A9P48067 706 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 GRB2P62993 217 aaKnown RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 SORDQ00796 357 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 HSD17B12Q53GQ0 312 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 LINC01560Q8TB33 94 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 DTD1Q8TEA8 209 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 RORBQ92753 470 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 RNF166Q96A37 237 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 ZNF799Q96GE5 643 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 KCNJ15Q99712 375 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 OR10A4Q9H209 315 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 MMP27Q9H306 513 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 RIMS4Q9H426 269 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 NPDC1Q9NQX5 325 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-204ENST00000467731 ABCB10Q9NRK6 738 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 BABAM2Q9NXR7 383 aa5.95□□□□□ -1.46
SCAF4-204ENST00000467731 WIPF3A6NGB9 483 aa5.94□□□□□ -1.46
SCAF4-204ENST00000467731 GPR37O15354 613 aa5.94□□□□□ -1.46
SCAF4-204ENST00000467731 PNPP00491 289 aa5.94□□□□□ -1.46
SCAF4-204ENST00000467731 FBP1P09467 338 aa5.94□□□□□ -1.46
SCAF4-204ENST00000467731 SLC2A1P11166 492 aa5.94□□□□□ -1.46
SCAF4-204ENST00000467731 APLNRP35414 380 aa5.94□□□□□ -1.46
SCAF4-204ENST00000467731 CX3CR1P49238 355 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms