RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 IGSF9BQ9UPX0 1349 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 ADAMTS13Q76LX8 1427 aa2.58□□□□□ -2
VPS13A-209ENST00000467124 A0A0A6YYD5 115 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 A0A0U1RQV1 116 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 A0A1B0GW15 77 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 SEC14L6B5MCN3 397 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 M0R1X1 148 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 RBFOX2O43251 390 aaKnown RBP eCLIP2.57□□□□□ -2
VPS13A-209ENST00000467124 B4GALT5O43286 388 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 TRBV12-3P01733 135 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 IVLP07476 585 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 GFAPP14136 432 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 GNRHRP30968 328 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 CASQ1P31415 396 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 UBE2KP61086 200 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 SLC35A1P78382 337 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 RPL18AQ02543 176 aaKnown RBP2.57□□□□□ -2
VPS13A-209ENST00000467124 DYNC1I2Q13409 638 aaKnown RBP2.57□□□□□ -2
VPS13A-209ENST00000467124 MAD2L1BPQ15013 274 aaPredicted RBP2.57□□□□□ -2
VPS13A-209ENST00000467124 FAM27D1Q5T7N8 215 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 THOC7Q6I9Y2 204 aaKnown RBP2.57□□□□□ -2
VPS13A-209ENST00000467124 WDR86Q86TI4 376 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 MDP1Q86V88 176 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 TMEM256Q8N2U0 113 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 C19orf18Q8NEA5 215 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 GLT1D1Q96MS3 346 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 RDH12Q96NR8 316 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 SDHCQ99643 169 aaPredicted RBP2.57□□□□□ -2
VPS13A-209ENST00000467124 STMN4Q9H169 189 aaPredicted RBP2.57□□□□□ -2
VPS13A-209ENST00000467124 FBXO6Q9NRD1 293 aaPredicted RBP2.57□□□□□ -2
VPS13A-209ENST00000467124 DDX19AQ9NUU7 478 aaKnown RBP2.57□□□□□ -2
VPS13A-209ENST00000467124 SIGLEC7Q9Y286 467 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 PPIL1Q9Y3C6 166 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 SBNO1A3KN83 1393 aa2.57□□□□□ -2
VPS13A-209ENST00000467124 AK9Q5TCS8 1911 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 MGAT4DA6NG13 374 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 OR5H1A6NKK0 313 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 GOLGA8JA6NMD2 632 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 RSPH10B2B2RC85 870 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 LINC01619G3V211 115 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 PRMT5O14744 637 aaPredicted RBP2.56□□□□□ -2
VPS13A-209ENST00000467124 CHST10O43529 356 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 DHRS3O75911 302 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 YIF1AO95070 293 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 TTC4O95801 387 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 NPPAP01160 153 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 IGLV3-25P01717 112 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 HLA-DQB1P01920 261 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 RHOXF2BP0C7M4 288 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 RSPH10BP0C881 870 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 GOLGA8HP0CJ92 632 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 HTR1DP28221 377 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 MLF1P58340 268 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 INCA1Q0VD86 236 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 ST3GAL4Q11206 333 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 DMC1Q14565 340 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 TNXAQ16473 311 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 NANOGP8Q6NSW7 305 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 Q6ZSR6 202 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 RBM45Q8IUH3 476 aaKnown RBP2.56□□□□□ -2
VPS13A-209ENST00000467124 DAW1Q8N136 415 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 ATPAF2Q8N5M1 289 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 TTLQ8NG68 377 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 OR10G6Q8NH81 332 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 DCAKDQ8WVC6 231 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 CDKL2Q92772 493 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 ADTRPQ96IZ2 230 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 FAM19A4Q96LR4 140 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 OR4K3Q96R72 315 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 KCNS3Q9BQ31 491 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 LZTS2Q9BRK4 669 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 RAB1BQ9H0U4 201 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 OR51B5Q9H339 312 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 ZNF302Q9NR11 478 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 C8orf17Q9NRJ1 99 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 CLEC2DQ9UHP7 191 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 VAX2Q9UIW0 290 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 SIGLEC9Q9Y336 463 aa2.56□□□□□ -2
VPS13A-209ENST00000467124 FAM240AA0A1B0GVK7 77 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 GSTTP1A0A1W2PQM5 241 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 H7C2Y5 167 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 TNFRSF11BO00300 401 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 MANBAO00462 879 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 MED6O75586 246 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 CCNKO75909 580 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 VAMP5O95183 116 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 PTHP01270 115 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 ZNF688P0C7X2 276 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 CCL2P13500 99 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 PAX6P26367 422 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 APLNRP35414 380 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 NUP214P35658 2090 aaPredicted RBP2.55□□□□□ -2
VPS13A-209ENST00000467124 ARR3P36575 388 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 MTPNP58546 118 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 IL5RAQ01344 420 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 PNOCQ13519 176 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 RNASE13Q5GAN3 156 aaKnown RBP2.55□□□□□ -2
VPS13A-209ENST00000467124 ZNF691Q5VV52 312 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 APOBEC3HQ6NTF7 200 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms