RNA–Protein interactions for RNA: ENST00000466971.1

NFX1-206, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 5

Gene NFX1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-206	ENST00000466971	DGCR2	P98153	550 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SPOCK1	Q08629	439 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	PMPCA	Q10713	525 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	MEF2D	Q14814	521 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	TATDN3	Q17R31	274 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	PNLIPRP3	Q17RR3	467 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	GSG1	Q2KHT4	349 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	PLA1A	Q53H76	456 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	KRTCAP3	Q53RY4	240 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ACTBL2	Q562R1	376 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	CLVS2	Q5SYC1	327 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ATP1A1-AS1	Q5TC04	95 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	OTP	Q5XKR4	325 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	AWAT2	Q6E213	333 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	CDPF1	Q6NVV7	123 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ZNF774	Q6NX45	483 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	COLCA1	Q6ZS62	124 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971		Q6ZS92	163 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	BTN2A1	Q7KYR7	527 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ASCL5	Q7RTU5	278 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	NUFIP2	Q7Z417	695 aa	Known RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SIAH3	Q8IW03	269 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SKA3	Q8IX90	412 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	TUSC5	Q8IXB3	177 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ZNF101	Q8IZC7	436 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	UBE2J2	Q8N2K1	259 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	C17orf78	Q8N4C9	275 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	TMEM229B	Q8NBD8	167 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	CSNK2A3	Q8NEV1	391 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	OR51A2	Q8NGJ7	313 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	OR13C9	Q8NGT0	318 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	OR6K3	Q8NGY3	331 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SNRNP27	Q8WVK2	155 aa	Known RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ASB13	Q8WXK3	278 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	PIGT	Q969N2	578 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	PPP1R14A	Q96A00	147 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SPSB4	Q96A44	273 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SGK3	Q96BR1	496 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ORAI1	Q96D31	301 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ADAT3	Q96EY9	351 aa	Predicted RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	MED30	Q96HR3	178 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	REEP6	Q96HR9	211 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	PSMG3-AS1	Q96PY0	264 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	GPER1	Q99527	375 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	C1QTNF5	Q9BXJ0	243 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	WNT5B	Q9H1J7	359 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	DEFB127	Q9H1M4	99 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	AUNIP	Q9H7T9	357 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	CNTD2	Q9H8S5	307 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	GPN1	Q9HCN4	374 aa	Predicted RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	OBP2B	Q9NPH6	170 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SLC7A10	Q9NS82	523 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ING3	Q9NXR8	418 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SPRR3	Q9UBC9	169 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	CLCF1	Q9UBD9	225 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	NLK	Q9UBE8	527 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	DKK4	Q9UBT3	224 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	KCNN3	Q9UGI6	736 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	ZNF221	Q9UK13	617 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	CLEC4A	Q9UMR7	237 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	SLC7A11	Q9UPY5	501 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	NOP16	Q9Y3C1	178 aa	Known RBP	4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	LAMA1	P25391	3075 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	NCKAP5	O14513	1909 aa		4.17	□□□□□ -1.74
NFX1-206	ENST00000466971	TRAV18	A0A075B6X5	111 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971		A0A087WV48	116 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971		A0A0B4J203	849 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	LINC00854	A0A1B0GVQ3	168 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	C7orf66	A4D0T2	115 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	FAM181B	A6NEQ2	426 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	SERPINE3	A8MV23	424 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	WDR1	O75083	606 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	PEX14	O75381	377 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	CCNK	O75909	580 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	KDM4B	O94953	1096 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	NDUFB6	O95139	128 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	TGM6	O95932	706 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	CYB5A	P00167	134 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	TCRB	P04435	133 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	TPO	P07202	933 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	H2AFB2	P0C5Z0	115 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	SLC2A1	P11166	492 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	NAT2	P11245	290 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	SPN	P16150	400 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	ABO	P16442	354 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	PSMB1	P20618	241 aa	Known RBP	4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	CPT2	P23786	658 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	MPZ	P25189	248 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	STOM	P27105	288 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	HOXC12	P31275	282 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	APLNR	P35414	380 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	PTGFR	P43088	359 aa		4.16	□□□□□ -1.74
NFX1-206	ENST00000466971	EIF2B2	P49770	351 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms