RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 LAMTOR5O43504 91 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 IL2RAP01589 272 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 IGLV3-1P01715 115 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 RLN2P04090 185 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 GSTP1P09211 210 aaKnown RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 FAHP16930 419 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 FOLR3P41439 243 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 DUSP3P51452 185 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 UBE2V2Q15819 145 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 KCTD9Q7L273 389 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 YRDCQ86U90 279 aaKnown RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 OR10K1Q8NGX5 313 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 OR6K3Q8NGY3 331 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 MITD1Q8WV92 249 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 PPP1R1CQ8WVI7 109 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 FBXO17Q96EF6 278 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 NAA11Q9BSU3 229 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 SDHAF2Q9NX18 166 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 STMND1H3BQB6 276 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 CBR3O75828 277 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 VAMP5O95183 116 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 CER1O95813 267 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 NR2C1P13056 603 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 CALCRP30988 508 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 NTF4P34130 210 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 PTGFRP43088 359 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 ZNF133P52736 654 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 ATP1B3P54709 279 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 RAC1P63000 192 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 CSNK2A1P68400 391 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 SRSF4Q08170 494 aaKnown RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 ECH1Q13011 328 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 ATXN7L3Q14CW9 347 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 ZMYND11Q15326 602 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 LPAL2Q16609 132 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 BEX5Q5H9J7 111 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 PEAR1Q5VY43 1037 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 TMEM65Q6PI78 240 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 FOXL2NBQ6ZUU3 175 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 HOGA1Q86XE5 327 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 OR51T1Q8NGJ9 327 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 PHB2Q99623 299 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 ULBP2Q9BZM5 246 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 WDR13Q9H1Z4 485 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 PLEK2Q9NYT0 353 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 FOXD3Q9UJU5 478 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-217ENST00000466159 PRELID1Q9Y255 219 aa7.85□□□□□ -1.15
SYNE1-217ENST00000466159 MFSD2BA6NFX1 497 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 C19orf67A6NJJ6 358 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 MFNGO00587 321 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 DHRS3O75911 302 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 OTX2P32243 289 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 HIST1H3AP68431 136 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 FGL1Q08830 312 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 Q0VFX4 171 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 SNAI3Q3KNW1 292 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 HIST2H3PS2Q5TEC6 136 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 C11orf87Q6NUJ2 197 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 LPCAT3Q6P1A2 487 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 HIST2H3AQ71DI3 136 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 SLC51BQ86UW2 128 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 RELL2Q8NC24 303 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-217ENST00000466159 OR56B1Q8NGI3 324 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 FBXW5Q969U6 566 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 ZC3H10Q96K80 434 aaKnown RBP7.84□□□□□ -1.15
SYNE1-217ENST00000466159 GUCD1Q96NT3 240 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 MICU1Q9BPX6 476 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 PIGQQ9BRB3 760 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 OR10A2Q9H208 303 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 COQ3Q9NZJ6 369 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 COMMD9Q9P000 198 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 PIGLQ9Y2B2 252 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 KCNMB2Q9Y691 235 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 A0A0U1RQV5 110 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 EEF1E1-BLOC1S5C9J1V9 151 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 M0R135 149 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 RFPL3SP0C7P2 107 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 FCGR2AP12318 317 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 PRF1P14222 555 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 TBPP20226 339 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 M6PRP20645 277 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 SERPINA2P20848 420 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 PRKACBP22694 351 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 AGTR1P30556 359 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 NPY4RP50391 375 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 PRSS12P56730 875 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 B3GALT5-AS1P59052 145 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 ARFRP1Q13795 201 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 PNLDC1Q8NA58 520 aaKnown RBP7.84□□□□□ -1.15
SYNE1-217ENST00000466159 OR5M9Q8NGP3 310 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 TERB2Q8NHR7 220 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 MAFIPQ8WZ33 124 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 PIGTQ969N2 578 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 ZNF799Q96GE5 643 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 URM1Q9BTM9 101 aaKnown RBP7.84□□□□□ -1.15
SYNE1-217ENST00000466159 ST6GALNAC5Q9BVH7 336 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 ANAPC10Q9UM13 185 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 TNFSF18Q9UNG2 199 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 V9GYS6 101 aa7.84□□□□□ -1.15
SYNE1-217ENST00000466159 PMS2P1A4D2B8 440 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms