RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZNF84P51523 738 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 YPEL5P62699 121 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 FOXK1P85037 733 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 SPEM2Q0P670 501 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 IAH1Q2TAA2 248 aaPredicted RBP17.48■□□□□ 0.39
SDF4-205ENST00000465727 ADAM5Q6NVV9 412 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 RTN4RL2Q86UN3 420 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 YAF2Q8IY57 180 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 FAM24BQ8N5W8 94 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 AVL9Q8NBF6 648 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 GPBAR1Q8TDU6 330 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 SLC37A2Q8TED4 501 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 PTPMT1Q8WUK0 201 aaPredicted RBP17.48■□□□□ 0.39
SDF4-205ENST00000465727 URM1Q9BTM9 101 aaKnown RBP17.48■□□□□ 0.39
SDF4-205ENST00000465727 PBDC1Q9BVG4 233 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 GGACTQ9BVM4 153 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 OPA3Q9H6K4 179 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 MOB1AQ9H8S9 216 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 TREM2Q9NZC2 230 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 C14orf166Q9Y224 244 aaKnown RBP17.48■□□□□ 0.39
SDF4-205ENST00000465727 UMAD1C9J7I0 102 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 GMFGO60234 142 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 DCAF7P61962 342 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 ASB10Q8WXI3 467 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 C1orf147Q96MC9 270 aaPredicted RBP17.48■□□□□ 0.39
SDF4-205ENST00000465727 CHRDQ9H2X0 955 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 AMDHD2Q9Y303 409 aa17.48■□□□□ 0.39
SDF4-205ENST00000465727 NPIPB13A6NJU9 1138 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 NPIPB4C9JG80 1138 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 GLRA1P23415 457 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 NTSR1P30989 418 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 TMEM50BP56557 158 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 SSTP61278 116 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 ARFRP1Q13795 201 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 TGIF1Q15583 401 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 OR2B11Q5JQS5 317 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 GRINAQ7Z429 371 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 TMEM104Q8NE00 496 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 FNDC9Q8TBE3 224 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 ADIPOR1Q96A54 375 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 SLAMF6Q96DU3 332 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 GABRG3Q99928 467 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 RSRP1Q9BUV0 290 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 EIF5A2Q9GZV4 153 aaKnown RBP17.47■□□□□ 0.39
SDF4-205ENST00000465727 SMDT1Q9H4I9 107 aa17.47■□□□□ 0.39
SDF4-205ENST00000465727 SOX1O00570 391 aaPredicted RBP17.46■□□□□ 0.39
SDF4-205ENST00000465727 ZP4Q12836 540 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 FOXRED2Q8IWF2 684 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 MMABQ96EY8 250 aaPredicted RBP17.46■□□□□ 0.39
SDF4-205ENST00000465727 RAB33BQ9H082 229 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 SLC35B3Q9H1N7 401 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 KCNJ16Q9NPI9 418 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 STRAPQ9Y3F4 350 aaKnown RBP17.46■□□□□ 0.39
SDF4-205ENST00000465727 ATG2BQ96BY7 2078 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 TRBV23-1A0A0A0MS06 115 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 BORCS7-ASMTA0A0B4J1R7 106 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 RAD51DO75771 328 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 IFNA21P01568 189 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 OR2B8PP59922 312 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 TMEM196Q5HYL7 178 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 ZNF321PQ8N8H1 164 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 ZNF565Q8N9K5 539 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 LFNGQ8NES3 379 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 KCNK17Q96T54 332 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 TBL1XR1Q9BZK7 514 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 CRISPLD2Q9H0B8 497 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 EHFQ9NZC4 300 aa17.46■□□□□ 0.39
SDF4-205ENST00000465727 A0A1B0GW64 132 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 RHPN2P1A8MT19 583 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 NPIPA5E9PKD4 350 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 HOXA5P20719 270 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 CSNK2A1P68400 391 aaPredicted RBP17.45■□□□□ 0.38
SDF4-205ENST00000465727 FMODQ06828 376 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 FAM219AQ8IW50 185 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 CSNK2A3Q8NEV1 391 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 OR10H5Q8NGA6 315 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 ARHGAP5-AS1Q96IT6 56 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 S100A13Q99584 98 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 C8orf33Q9H7E9 229 aaPredicted RBP17.45■□□□□ 0.38
SDF4-205ENST00000465727 NPIPA1Q9UND3 350 aa17.45■□□□□ 0.38
SDF4-205ENST00000465727 FTCDNL1E5RQL4 147 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 ZNF354AO60765 605 aaPredicted RBP17.44■□□□□ 0.38
SDF4-205ENST00000465727 TNFP01375 233 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 BCKDHBP21953 392 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 SNU13P55769 128 aaKnown RBP17.44■□□□□ 0.38
SDF4-205ENST00000465727 ZNF616Q08AN1 781 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 PRR22Q8IZ63 422 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 GINS3Q9BRX5 216 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 IL23AQ9NPF7 189 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 SLC34A2O95436 690 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 IGKV3-11P04433 115 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 HLA-DOBP13765 273 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 CDX1P47902 265 aaPredicted RBP17.44■□□□□ 0.38
SDF4-205ENST00000465727 CAMLGP49069 296 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 SLC35A1P78382 337 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 ZNF239Q16600 458 aaKnown RBP17.44■□□□□ 0.38
SDF4-205ENST00000465727 RPUSD3Q6P087 351 aaKnown RBP17.44■□□□□ 0.38
SDF4-205ENST00000465727 HEPN1Q6WQI6 88 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 DBX2Q6ZNG2 339 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 OR5AS1Q8N127 324 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms