RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 AMY2BP19961 511 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 CYCSP99999 105 aaKnown RBP16.13■□□□□ 0.17
SYNE4-204ENST00000465425 KISS1Q15726 138 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 MOB3CQ70IA8 216 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 TMEM17Q86X19 198 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 STPG2Q8N412 459 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 SCGB3A2Q96PL1 93 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 ARPC5LQ9BPX5 153 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 OCSTAMPQ9BR26 566 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 ANAPC10Q9UM13 185 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 SIT1Q9Y3P8 196 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 MED12Q93074 2177 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 DBX1A6NMT0 343 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 MFNGO00587 321 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 RAD51DO75771 328 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 CELA2AP08217 269 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 OR3A2P47893 321 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 SNTB1Q13884 538 aaKnown RBP16.13■□□□□ 0.17
SYNE4-204ENST00000465425 HLA-BQ31612 363 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 ZBTB44Q8NCP5 570 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 MRPS24Q96EL2 167 aaKnown RBP16.13■□□□□ 0.17
SYNE4-204ENST00000465425 S100A13Q99584 98 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 ST6GALNAC5Q9BVH7 336 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 MS4A7Q9GZW8 240 aaPredicted RBP16.13■□□□□ 0.17
SYNE4-204ENST00000465425 GHRLQ9UBU3 117 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 GDF9O60383 454 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 EIF1BO60739 113 aaKnown RBP16.12■□□□□ 0.17
SYNE4-204ENST00000465425 APOC3P02656 99 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 KLK3P07288 261 aaPredicted RBP16.12■□□□□ 0.17
SYNE4-204ENST00000465425 CNR1P21554 472 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 CTSSP25774 331 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 PTGFRP43088 359 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 H3F3AP84243 136 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 PAN3Q58A45 887 aaKnown RBP16.12■□□□□ 0.17
SYNE4-204ENST00000465425 LRRC18Q8N456 261 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 DCUN1D4Q92564 292 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 HLA-CQ95604 372 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 JSRP1Q96MG2 331 aaPredicted RBP16.12■□□□□ 0.17
SYNE4-204ENST00000465425 GNRHR2Q96P88 292 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 NMES1Q9C002 83 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 C5orf66Q9H5L9 145 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 GPR132Q9UNW8 380 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 CSAG2Q9Y5P2 127 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 IGHV3-15A0A0B4J1V0 119 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 E9PLN8 166 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 IL11RAQ14626 422 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 UNQ6126/PRO20091Q6UXV3 157 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 SSC4DQ8WTU2 575 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 LIN37Q96GY3 246 aaPredicted RBP16.12■□□□□ 0.17
SYNE4-204ENST00000465425 WDFY3Q8IZQ1 3526 aa16.12■□□□□ 0.17
SYNE4-204ENST00000465425 IGHV1-45A0A0A0MS14 117 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 STMND1H3BQB6 276 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 DHRS3O75911 302 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 VAMP5O95183 116 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 FGF5P12034 268 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 TMEM185AQ8NFB2 350 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 LHFPL5Q8TAF8 219 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 IFI44Q8TCB0 444 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 LYZL4Q96KX0 146 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 RBM24Q9BX46 236 aaKnown RBP16.11■□□□□ 0.17
SYNE4-204ENST00000465425 DKKL1Q9UK85 242 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 LOC102723996A0A087X1L8 192 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 PRF1P14222 555 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 PGAM2P15259 253 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 SERPINA2P20848 420 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 FPR2P25090 351 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 THBS4P35443 961 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 DSCR4P56555 118 aaPredicted RBP16.11■□□□□ 0.17
SYNE4-204ENST00000465425 TAS2R46P59540 309 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 CSNK2A1P68400 391 aaPredicted RBP16.11■□□□□ 0.17
SYNE4-204ENST00000465425 SLC9A3R2Q15599 337 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 EXT1Q16394 746 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 C10orf128Q5T292 105 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 CSNK2A3Q8NEV1 391 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 MR1Q95460 341 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 ZNF385AQ96PM9 386 aaKnown RBP16.11■□□□□ 0.17
SYNE4-204ENST00000465425 NAA11Q9BSU3 229 aaPredicted RBP16.11■□□□□ 0.17
SYNE4-204ENST00000465425 LDAHQ9H6V9 325 aa16.11■□□□□ 0.17
SYNE4-204ENST00000465425 ELL3Q9HB65 397 aaPredicted RBP16.11■□□□□ 0.17
SYNE4-204ENST00000465425 PTRH2Q9Y3E5 179 aaKnown RBP16.11■□□□□ 0.17
SYNE4-204ENST00000465425 A0A0U1RQV5 110 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 C5orf63A6NC05 138 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 KCNAB3O43448 404 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 CCL3P10147 92 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 PI3P19957 117 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 BLVRBP30043 206 aaPredicted RBP16.1■□□□□ 0.17
SYNE4-204ENST00000465425 EIF3IQ13347 325 aaKnown RBP16.1■□□□□ 0.17
SYNE4-204ENST00000465425 CLEC18BQ6UXF7 455 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 CCDC36Q8IYA8 594 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 FAM89BQ8N5H3 189 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 PP6455Q8WZ26 134 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 BARX1Q9HBU1 254 aaPredicted RBP16.1■□□□□ 0.17
SYNE4-204ENST00000465425 OR5H15A6NDH6 313 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 CEACAM18A8MTB9 384 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 HTR3BO95264 441 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 SFT2D2O95562 160 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 FCGR2AP12318 317 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 FAHP16930 419 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 SSR4P51571 173 aa16.1■□□□□ 0.17
SYNE4-204ENST00000465425 SNU13P55769 128 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms