RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	PCCB	P05166	539 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FGF1	P05230	155 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RHOC	P08134	193 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FOLR2	P14207	255 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PAICS	P22234	425 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	LCN1	P31025	176 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SERPINB10	P48595	397 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	KHK	P50053	298 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	LIMK2	P53671	638 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RGS8	P57771	180 aa	Predicted RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DEFA1	P59665	94 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DEFA3	P59666	94 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	HILS1	P60008	231 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RPS20	P60866	119 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ST8SIA6	P61647	398 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RAP1A	P62834	184 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	MRPS22	P82650	360 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CD300C	Q08708	224 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	AQP6	Q13520	282 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ENPP2	Q13822	863 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	P2RY14	Q15391	338 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	LRRC37A5P	Q49AS3	106 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	VAX1	Q5SQQ9	334 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ATAD3C	Q5T2N8	411 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TMEM215	Q68D42	235 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	BTNL3	Q6UXE8	466 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	NHLRC1	Q6VVB1	395 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ZNF497	Q6ZNH5	498 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DHDDS	Q86SQ9	333 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CACUL1	Q86Y37	369 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	C10orf107	Q8IVU9	208 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	AQP12A	Q8IXF9	295 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	C4orf33	Q8N1A6	199 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	NUP37	Q8NFH4	326 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RAB2B	Q8WUD1	216 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PIH1D2	Q8WWB5	315 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CKAP2	Q8WWK9	683 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RPL3L	Q92901	407 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TMEM186	Q96B77	213 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	C12orf43	Q96C57	262 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CNRIP1	Q96F85	164 aa	Predicted RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PRRC1	Q96M27	445 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	HBEGF	Q99075	208 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	GPR22	Q99680	433 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	NIPSNAP1	Q9BPW8	284 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	EBF4	Q9BQW3	602 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ATG101	Q9BSB4	218 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SLC5A7	Q9GZV3	580 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	VCX2	Q9H322	139 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	WDR41	Q9HAD4	459 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CCNB1IP1	Q9NPC3	277 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	B3GAT2	Q9NPZ5	323 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DYRK4	Q9NR20	520 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PNO1	Q9NRX1	252 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	LYAR	Q9NX58	379 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	VNN3	Q9NY84	501 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	IL20RA	Q9UHF4	553 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PSG11	Q9UQ72	335 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ANKRD12	Q6UB98	2062 aa		4.13	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TRBV5-4	A0A0C4DH59	114 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SUPT3H	B4E1H0	165 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	C10orf142	B7Z368	130 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	NPIPA7	E9PJI5	369 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278		F8WDY8	70 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SLC1A7	O00341	560 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	BHLHE40	O14503	412 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	B4GALT2	O60909	372 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	EIF3G	O75821	320 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	VAPB	O95292	243 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	NPIPA8	P0DM63	369 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ME2	P23368	584 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SLC6A1	P30531	599 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CD70	P32970	193 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SPR	P35270	261 aa	Predicted RBP	4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RFC3	P40938	356 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ETV6	P41212	452 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CSK	P41240	450 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ZNF140	P52738	457 aa	Predicted RBP	4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	MAX	P61244	160 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PKIA	P61925	76 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ERVK-25	P63136	954 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CRADD	P78560	199 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DHODH	Q02127	395 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	OVGP1	Q12889	678 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ZNF239	Q16600	458 aa	Known RBP	4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	HIKESHI	Q53FT3	197 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	LGSN	Q5TDP6	509 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CDHR3	Q6ZTQ4	885 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TMEM26	Q6ZUK4	368 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SLC35D2	Q76EJ3	337 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CARM1	Q86X55	608 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CATSPERD	Q86XM0	798 aa		4.12	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TMEM25	Q86YD3	366 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms