RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CLVS2Q5SYC1 327 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 LYG2Q86SG7 212 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 OR4K15Q8NH41 348 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 MARCH1Q8TCQ1 289 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 CASTOR1Q8WTX7 329 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 ULBP2Q9BZM5 246 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 PLEK2Q9NYT0 353 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 PLEKHA6Q9Y2H5 1048 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 OR5H14A6NHG9 310 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 STMND1H3BQB6 276 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 TEX46H3BTG2 121 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 CHRM2P08172 466 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 NMBP08949 121 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 MPZP25189 248 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 STARP49675 285 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 GMFBP60983 142 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 CSNK2A1P68400 391 aaPredicted RBP16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 IL13RA1P78552 427 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 SLC23A3Q6PIS1 610 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 TIPARPQ7Z3E1 657 aaKnown RBP16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 TMEM105Q8N8V8 129 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 PIGQQ9BRB3 760 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 NUDT16L1Q9BRJ7 211 aaKnown RBP16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 NAA11Q9BSU3 229 aaPredicted RBP16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 ZNF224Q9NZL3 707 aa16.39■□□□□ 0.22
TSPAN4-210ENST00000464987 SHOXO15266 292 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 SCGNO76038 276 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 VAMP5O95183 116 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 SPDEFO95238 335 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 CD8AP01732 235 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 RPA2P15927 270 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 MPGP29372 298 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 HIST1H3AP68431 136 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 HIST2H3PS2Q5TEC6 136 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 ZNF660Q6AZW8 331 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 HIST2H3AQ71DI3 136 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 NAXDQ8IW45 347 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 ZDHHC22Q8N966 263 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 CCDC120Q96HB5 630 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 MICU1Q9BPX6 476 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 RDH8Q9NYR8 311 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 KIF25Q9UIL4 384 aa16.39■□□□□ 0.21
TSPAN4-210ENST00000464987 M0R135 149 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 EFSO43281 561 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 DHRS3O75911 302 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 IL2RAP01589 272 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 IFNA6P05013 189 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 VAMP1P23763 118 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 ZXDAP98168 799 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 ZNF546Q86UE3 836 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 SLC51BQ86UW2 128 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 MAFIPQ8WZ33 124 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 ROBO4Q8WZ75 1007 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 PIGTQ969N2 578 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 ZNF799Q96GE5 643 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 PDCD10Q9BUL8 212 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 REG4Q9BYZ8 158 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 TCFL5Q9UL49 500 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 PIGLQ9Y2B2 252 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 V9GYS6 101 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 FREM1Q5H8C1 2179 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 B8ZZF3 427 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 MFNGO00587 321 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 B3GALNT1O75752 331 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 PATE4P0C8F1 98 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 NR2C1P13056 603 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 PRF1P14222 555 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 TCN2P20062 427 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 SERPINA2P20848 420 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 OTX1P32242 354 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 SUCLG1P53597 346 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 C20orf196Q8IYI0 205 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 OR2AE1Q8NHA4 323 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 FBXW5Q969U6 566 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 MARVELD3Q96A59 401 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 WDR13Q9H1Z4 485 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 DEPPQ9NTK1 212 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 AHCTF1Q8WYP5 2266 aa16.38■□□□□ 0.21
TSPAN4-210ENST00000464987 FAM25EA8MYX2 175 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 RLN2P04090 185 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 GSTP1P09211 210 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 PTGFRP43088 359 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 ATP1B3P54709 279 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 HGFACQ04756 655 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 ECH1Q13011 328 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 BEX5Q5H9J7 111 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 KCTD9Q7L273 389 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 GGNQ86UU5 652 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 OR51T1Q8NGJ9 327 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 OR14L1PQ8NHC6 308 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 SCARB1Q8WTV0 552 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 MITD1Q8WV92 249 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 PPP1R1CQ8WVI7 109 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 A0A0U1RQV5 110 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 FCGR2AP12318 317 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 GK2Q14410 553 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 ATXN7L3Q14CW9 347 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 RGS7BPQ6MZT1 257 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 HOGA1Q86XE5 327 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms