RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 NKX6-3A6NJ46 265 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 M0R1W7 72 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 TIPRLO75663 272 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 SLC2A1P11166 492 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 DDOSTP39656 456 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 NAA10P41227 235 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-220ENST00000464800 PSME3P61289 254 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 LY6EQ16553 131 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 OXLD1Q5BKU9 147 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 PGBD2Q6P3X8 592 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 OR1M1Q8NGA1 313 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 OR4S1Q8NGB4 309 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 OR51G2Q8NGK0 314 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 SEH1LQ96EE3 360 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 SSX3Q99909 188 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 FAM234AQ9H0X4 552 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 CCDC134Q9H6E4 229 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 RAB18Q9NP72 206 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 AURKAIP1Q9NWT8 199 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-220ENST00000464800 ABCD2Q9UBJ2 740 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 SAMD4AQ9UPU9 718 aaKnown RBP11.93□□□□□ -0.5
MCF2L-220ENST00000464800 N6AMT1Q9Y5N5 214 aa11.93□□□□□ -0.5
MCF2L-220ENST00000464800 A0A1W2PQ09 198 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 IDH3BO43837 385 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 VSIG10L2P0DP72 767 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 SELLP14151 372 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 PYCR1P32322 319 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 TGM4P49221 684 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 PRKXP51817 358 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.92□□□□□ -0.5
MCF2L-220ENST00000464800 BLMHQ13867 455 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 TAF13Q15543 124 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 LRRC75BQ2VPJ9 315 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 STUMQ69YW2 141 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 DCXRQ7Z4W1 244 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 ZDHHC21Q8IVQ6 265 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 PROKR2Q8NFJ6 384 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 OR9Q1Q8NGQ5 310 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 SPSB4Q96A44 273 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 KCNJ15Q99712 375 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 DNTTIP1Q9H147 329 aa11.92□□□□□ -0.5
MCF2L-220ENST00000464800 NOTCH3Q9UM47 2321 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 TVP23AA6NH52 213 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 TBX1O43435 398 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 GMNNO75496 209 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 GADD45GO95257 159 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 PSKH1P11801 424 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 SMIM11AP58511 58 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 GMFBP60983 142 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 NSUN5P1Q3KNT7 163 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 ATPAF1Q5TC12 328 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-220ENST00000464800 SLC16A9Q7RTY1 509 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 LYG1Q8N1E2 194 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 DTX3Q8N9I9 347 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 OR5T2Q8NGG2 359 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 C17orf50Q8WW18 174 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 ITPKCQ96DU7 683 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 NPFFR1Q9GZQ6 430 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 TLNRD1Q9H1K6 362 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 CENPMQ9NSP4 180 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 HAO2Q9NYQ3 351 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 SLC25A10Q9UBX3 287 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-220ENST00000464800 SF3B6Q9Y3B4 125 aaKnown RBP11.91□□□□□ -0.5
MCF2L-220ENST00000464800 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 V9GYQ6 96 aa11.91□□□□□ -0.5
MCF2L-220ENST00000464800 ZNF878C9JN71 531 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 CDIPTO14735 213 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 FBXO24O75426 580 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 SPARCP09486 303 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 AMY2BP19961 511 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 GNALP38405 381 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 FAM3AP98173 230 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 SPIBQ01892 262 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 TIGD6Q17RP2 521 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 VAX1Q5SQQ9 334 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 SLC35F1Q5T1Q4 408 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 RNF148Q8N7C7 305 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 OR2T4Q8NH00 348 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 RORBQ92753 470 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 PHF21AQ96BD5 680 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 SLAMF6Q96DU3 332 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 CMTM5Q96DZ9 223 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 MED30Q96HR3 178 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 REEP6Q96HR9 211 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 PYURFQ96I23 114 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 PAPOLGQ9BWT3 736 aaKnown RBP11.9□□□□□ -0.5
MCF2L-220ENST00000464800 GORASP2Q9H8Y8 452 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 SPAG4Q9NPE6 437 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 SNTG1Q9NSN8 517 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 ZNF391Q9UJN7 358 aa11.9□□□□□ -0.5
MCF2L-220ENST00000464800 H0YAE9 185 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 ANGPTL7O43827 346 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 SEMG1P04279 462 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 ANXA2P07355 339 aaKnown RBP11.89□□□□□ -0.51
MCF2L-220ENST00000464800 NDUFB7P17568 137 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 POU1F1P28069 291 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 CX3CR1P49238 355 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 CAV3P56539 151 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 EMX1Q04741 257 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-220ENST00000464800 AANATQ16613 207 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms