RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 A8MV72 311 aaPredicted RBP14.86□□□□□ -0.03
VPS52-214ENST00000463486 LOC110117498-PIK3R3F6TDL0 507 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 IFNL4K9M1U5 179 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 FAM20BO75063 409 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 RPP14O95059 124 aaKnown RBP14.86□□□□□ -0.03
VPS52-214ENST00000463486 FSTL3O95633 263 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 CYB5R3P00387 301 aaPredicted RBP14.86□□□□□ -0.03
VPS52-214ENST00000463486 IGHV2-5P01817 119 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 GNAO1P09471 354 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 HOXA4Q00056 320 aaPredicted RBP14.86□□□□□ -0.03
VPS52-214ENST00000463486 TP53I3Q53FA7 332 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 PRSS35Q8N3Z0 413 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 DHRSXQ8N5I4 330 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 ACBD7Q8N6N7 88 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 YIPF7Q8N8F6 280 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 CYGBQ8WWM9 190 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 ITFG2Q969R8 447 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 ADI1Q9BV57 179 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 ZNF665Q9H7R5 613 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 MOB1AQ9H8S9 216 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 TMEM165Q9HC07 324 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 ACOXLQ9NUZ1 547 aa14.86□□□□□ -0.03
VPS52-214ENST00000463486 TGFAP01135 160 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 ATP6V1B1P15313 513 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 CCL1P22362 96 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 OR12D2P58182 307 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 BTG1P62324 171 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 ACTC1P68032 377 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 ACTA1P68133 377 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 RAB40BQ12829 278 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 PRDX4Q13162 271 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 FAM76BQ5HYJ3 339 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 FAM201AQ5SY85 155 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 BCL2L15Q5TBC7 163 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 LINC01356Q8N9X3 169 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 OR52I1Q8NGK6 324 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 CNIH3Q8TBE1 160 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 FBLIM1Q8WUP2 373 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 HPSE2Q8WWQ2 592 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 OR5P3Q8WZ94 311 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 TFAP2CQ92754 450 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 TLNRD1Q9H1K6 362 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 UFSP2Q9NUQ7 469 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 RPL36Q9Y3U8 105 aaKnown RBP14.85□□□□□ -0.03
VPS52-214ENST00000463486 PCDHGB1Q9Y5G3 927 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 MPC1Q9Y5U8 109 aa14.85□□□□□ -0.03
VPS52-214ENST00000463486 DAPL1A0PJW8 107 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 ZNF850A8MQ14 1090 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 H0YAE9 185 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 ZNF205O95201 554 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 LHBP01229 141 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 THBS2P35442 1172 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 CAPGP40121 348 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 PSMB10P40306 273 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 KIR3DL2P43630 455 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 MAP2K3P46734 347 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 NANOS3P60323 173 aaKnown RBP14.84□□□□□ -0.03
VPS52-214ENST00000463486 IL5RAQ01344 420 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 IL18R1Q13478 541 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 TMEM155Q4W5P6 130 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 WDR38Q5JTN6 314 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 TMEM42Q69YG0 159 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 FDX2Q6P4F2 183 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 ZNF826PQ6ZT77 177 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 KCTD20Q7Z5Y7 419 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 OR14K1Q8NGZ2 314 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 FAM71F1Q96KD3 344 aaPredicted RBP14.84□□□□□ -0.03
VPS52-214ENST00000463486 PAPOLGQ9BWT3 736 aaKnown RBP14.84□□□□□ -0.03
VPS52-214ENST00000463486 JAM3Q9BX67 310 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 FGF20Q9NP95 211 aaPredicted RBP14.84□□□□□ -0.03
VPS52-214ENST00000463486 TMEM160Q9NX00 188 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 V9GYS6 101 aa14.84□□□□□ -0.03
VPS52-214ENST00000463486 ZNF816-ZNF321PA0A0X1KG74 233 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 B4DSR2 109 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 F5H0A9 414 aaPredicted RBP14.83□□□□□ -0.04
VPS52-214ENST00000463486 P2RY10O00398 339 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 DHRS3O75911 302 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 LIMS3P0CW19 117 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 LIMS4P0CW20 117 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 RIPPLY3P57055 190 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 GALEQ14376 348 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 SNCBQ16143 134 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 ZBTB37Q5TC79 503 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 PEG10Q86TG7 708 aaKnown RBP14.83□□□□□ -0.04
VPS52-214ENST00000463486 LHFPL3Q86UP9 236 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 EGFL6Q8IUX8 553 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 SEMA6DQ8NFY4 1073 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 OR1M1Q8NGA1 313 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 PELI1Q96FA3 418 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 POM121Q96HA1 1249 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 ISG20L2Q9H9L3 353 aaKnown RBP14.83□□□□□ -0.04
VPS52-214ENST00000463486 FN3KRPQ9HA64 309 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 C14orf119Q9NWQ9 140 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 ERVK13-1Q9NX77 482 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 GNG8Q9UK08 70 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 HSPE1-MOB4S4R3N1 261 aa14.83□□□□□ -0.04
VPS52-214ENST00000463486 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.82□□□□□ -0.04
VPS52-214ENST00000463486 H0YJX3 145 aa14.82□□□□□ -0.04
VPS52-214ENST00000463486 TNFRSF13BO14836 293 aaPredicted RBP14.82□□□□□ -0.04
VPS52-214ENST00000463486 LMX1BO60663 402 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms