RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ITFG2Q969R8 447 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 MICU1Q9BPX6 476 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 MRI1Q9BV20 369 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 ADGRL4Q9HBW9 690 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 MMP26Q9NRE1 261 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 WARS2Q9UGM6 360 aaKnown RBP13.58□□□□□ -0.24
COL1A1-202ENST00000463440 COPS3Q9UNS2 423 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 INSIG2Q9Y5U4 225 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 CUBNO60494 3623 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 A0A0A6YYJ9 748 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 TRAV38-1A0A0B4J264 116 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 A0A0U1RQV5 110 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF670-ZNF695F2Z2N8 137 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 H3BNX3 289 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 ADRA2CP18825 462 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 EPHA1P21709 976 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 PITPNBP48739 271 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 CDC42P60953 191 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 CXCR4P61073 352 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF154Q13106 437 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 KRTAP24-1Q3LI83 254 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF322Q6U7Q0 402 aaPredicted RBP13.57□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF826PQ6ZT77 177 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 PHC2Q8IXK0 858 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 C19orf18Q8NEA5 215 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 OR1M1Q8NGA1 313 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 OR8J1Q8NGP2 316 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 FAM81AQ8TBF8 368 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF418Q8TF45 676 aaPredicted RBP13.57□□□□□ -0.24
COL1A1-202ENST00000463440 LYZL4Q96KX0 146 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 RTL8AQ9BWD3 113 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 TTTY10Q9BZA0 68 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 CLN6Q9NWW5 311 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 FAM206AQ9NX38 181 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 CLN8Q9UBY8 286 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 OPN4Q9UHM6 478 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 AUP1Q9Y679 476 aa13.57□□□□□ -0.24
COL1A1-202ENST00000463440 OOEPA6NGQ2 149 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 C3orf80F5H4A9 247 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 NDUFA2O43678 99 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 CST4P01036 141 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 ACKR3P25106 362 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 HTR1FP30939 366 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 CD80P33681 288 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 MAP2K3P46734 347 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 SRSF2Q01130 221 aaKnown RBP13.56□□□□□ -0.24
COL1A1-202ENST00000463440 POU4F2Q12837 409 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 PRDX4Q13162 271 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 SFRP4Q6FHJ7 346 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-202ENST00000463440 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 BTNL3Q6UXE8 466 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 COMMD2Q86X83 199 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 GALNT4Q8N4A0 578 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 OR51G2Q8NGK0 314 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 PIGCQ92535 297 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-202ENST00000463440 PBOV1Q9GZY1 135 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 RNPEPL1Q9HAU8 725 aa13.56□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF850A8MQ14 1090 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 PRR32B1ATL7 298 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 EI24O14681 340 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 ALPLP05186 524 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 ATP6V1B1P15313 513 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 PSMB10P40306 273 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 NPY4RP50391 375 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 EGR3Q06889 387 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 TMED1Q13445 227 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 WDR86Q86TI4 376 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 GCSAMQ8N6F7 178 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 LRRC29Q8WV35 223 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 RAB40AQ8WXH6 277 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 RFKQ969G6 155 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 ITPKCQ96DU7 683 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 HIST1H2AAQ96QV6 131 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 APOL4Q9BPW4 351 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 PPP1R3EQ9H7J1 279 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 MOB1AQ9H8S9 216 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 IMPAD1Q9NX62 359 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 USE1Q9NZ43 259 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 ERVK-18Q9QC07 812 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 NUFIP1Q9UHK0 495 aaKnown RBP13.55□□□□□ -0.24
COL1A1-202ENST00000463440 GTF2A1LQ9UNN4 478 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 DOCK11Q5JSL3 2073 aa13.55□□□□□ -0.24
COL1A1-202ENST00000463440 IGHV2-70DA0A0C4DH43 119 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF816-ZNF321PA0A0X1KG74 233 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 TMEM210A6NLX4 147 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 LOC110117498-PIK3R3F6TDL0 507 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 ADAM20O43506 726 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 FSHBP01225 129 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 LHBP01229 141 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 FPR2P25090 351 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 ATP6V1E1P36543 226 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 ALDH3A2P51648 485 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 CSNK2BP67870 215 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 HOXA4Q00056 320 aaPredicted RBP13.54□□□□□ -0.24
COL1A1-202ENST00000463440 PAX8Q06710 450 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 WDR25Q64LD2 544 aaPredicted RBP13.54□□□□□ -0.24
COL1A1-202ENST00000463440 KCTD8Q6ZWB6 473 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 THAP5Q7Z6K1 395 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms