RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 E2F6O75461 281 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 MOSP00540 346 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 PGA5P0DJD9 388 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 CCNE1P24864 410 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 HTR1EP28566 365 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 ARR3P36575 388 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 CEACAM3P40198 252 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 SLC18A1P54219 525 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 UAP1Q16222 522 aaPredicted RBP4.13□□□□□ -1.75
COPS3-205ENST00000463097 LPAL2Q16609 132 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 THEM4Q5T1C6 240 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 STRADAQ7RTN6 431 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 NELFCDQ8IXH7 590 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 NPBQ8NG41 125 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 OR4S2Q8NH73 311 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 NELFBQ8WX92 580 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 DNAJC9Q8WXX5 260 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 DNAJC19Q96DA6 116 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 RNF145Q96MT1 663 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 ZNF681Q96N22 645 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 OLFM3Q96PB7 478 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 REEP1Q9H902 201 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 SAR1AQ9NR31 198 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 SLC25A37Q9NYZ2 338 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 STX18Q9P2W9 335 aaKnown RBP4.13□□□□□ -1.75
COPS3-205ENST00000463097 COL5A2P05997 1499 aaPredicted RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 SLIT3O75094 1523 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 A0A0A6YYD5 115 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 SMIM31A0A1B0GVY4 71 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 MGAT4DA6NG13 374 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 SIGLEC16A6NMB1 481 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 SLC16A7O60669 478 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 KLF8O95600 359 aaPredicted RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 BGLAPP02818 100 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 PGA4P0DJD7 388 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 PGA3P0DJD8 388 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 ZNF30P17039 623 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 WARSP23381 471 aaKnown RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 PCK1P35558 622 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 RANBP1P43487 201 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 TAS2R60P59551 318 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 MAGOHP61326 146 aaKnown RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 IGLV3-21P80748 117 aaPredicted RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 ZNF266Q14584 549 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 TTLL9Q3SXZ7 439 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 CPTPQ5TA50 214 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 ZNF470Q6ECI4 717 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 CD300LGQ6UXG3 332 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 ACP7Q6ZNF0 438 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 SELENOHQ8IZQ5 122 aaKnown RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 GPD1LQ8N335 351 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 C17orf78Q8N4C9 275 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 C20orf203Q8NBC4 194 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 OR10AD1Q8NGE0 317 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 OR51G1Q8NGK1 321 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 OR6K2Q8NGY2 324 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 OR51A7Q8NH64 312 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 LRRC29Q8WV35 223 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 IFT81Q8WYA0 676 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 MAGOHBQ96A72 148 aaKnown RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 SGTBQ96EQ0 304 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 PCYOX1Q9UHG3 505 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 MRM2Q9UI43 246 aaKnown RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 NXT1Q9UKK6 140 aaKnown RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 TRAPPC4Q9Y296 219 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 DDX60Q8IY21 1712 aaKnown RBP4.12□□□□□ -1.75
COPS3-205ENST00000463097 ATRNO75882 1429 aa4.12□□□□□ -1.75
COPS3-205ENST00000463097 MYO5BQ9ULV0 1848 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 USP54Q70EL1 1684 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 ANKRD20A5PA0PJZ0 165 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 TVP23AA6NH52 213 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 TRPC5OSA6NMA1 111 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 GJE1A6NN92 205 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 SYCE1LA8MT33 242 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 K7EN84 100 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 PGRMC1O00264 195 aaKnown RBP4.11□□□□□ -1.75
COPS3-205ENST00000463097 DFFAO00273 331 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 LAD1O00515 517 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 NPIPB7O75200 414 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 DCTN3O75935 186 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 GCGP01275 180 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 IGKV5-2P06315 115 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 ERGP11308 486 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 PRPS2P11908 318 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 IGFBP3P17936 291 aaPredicted RBP4.11□□□□□ -1.75
COPS3-205ENST00000463097 PFN2P35080 140 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 STX17P56962 302 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 RPL18AQ02543 176 aaKnown RBP4.11□□□□□ -1.75
COPS3-205ENST00000463097 HERPUD1Q15011 391 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 MAD2L1BPQ15013 274 aaPredicted RBP4.11□□□□□ -1.75
COPS3-205ENST00000463097 TAL2Q16559 108 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 CHRFAM7AQ494W8 412 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 C3orf62Q6ZUJ4 267 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 TGIF2LYQ8IUE0 185 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 LRRC34Q8IZ02 419 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 STPG2Q8N412 459 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 LINC00469Q8N7U9 141 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 OR10W1Q8NGF6 305 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 SUN5Q8TC36 379 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 ZFP90Q8TF47 636 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms