RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 FAM71F1Q96KD3 344 aaPredicted RBP12.95□□□□□ -0.34
SND1-203ENST00000463020 WDFY2Q96P53 400 aa12.95□□□□□ -0.34
SND1-203ENST00000463020 TSSK2Q96PF2 358 aa12.95□□□□□ -0.34
SND1-203ENST00000463020 ACOXLQ9NUZ1 547 aa12.95□□□□□ -0.34
SND1-203ENST00000463020 DUX4Q9UBX2 424 aa12.95□□□□□ -0.34
SND1-203ENST00000463020 A0A087WUU8 490 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 IGHV1-69DA0A0B4J2H0 117 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 C5orf63A6NC05 138 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 ARRDC5A6NEK1 342 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 C3orf80F5H4A9 247 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 P2RY10O00398 339 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 GADD45GO95257 159 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 IGHV1-69P01742 117 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 FPR3P25089 353 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 POLR2IP36954 125 aaKnown RBP12.94□□□□□ -0.34
SND1-203ENST00000463020 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 HIST1H3AP68431 136 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 KRTAP27-1Q3LI81 207 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 FBLN7Q53RD9 439 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 HIST2H3PS2Q5TEC6 136 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 HIST2H3AQ71DI3 136 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 BOLLQ8N9W6 283 aaKnown RBP12.94□□□□□ -0.34
SND1-203ENST00000463020 ZSCAN4Q8NAM6 433 aaPredicted RBP12.94□□□□□ -0.34
SND1-203ENST00000463020 OR4C15Q8NGM1 316 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 GATAD2BQ8WXI9 593 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 C12orf43Q96C57 262 aaKnown RBP12.94□□□□□ -0.34
SND1-203ENST00000463020 FEVQ99581 238 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 CCDC90BQ9GZT6 254 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 GRHPRQ9UBQ7 328 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 ZNF281Q9Y2X9 895 aa12.94□□□□□ -0.34
SND1-203ENST00000463020 LRRC30A6NM36 301 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 PTGES3LE9PB15 166 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 CD14P08571 375 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 RPL4P36578 427 aaKnown RBP12.93□□□□□ -0.34
SND1-203ENST00000463020 HMGA2P52926 109 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 ST3GAL3Q11203 375 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 POU4F2Q12837 409 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 KRR1Q13601 381 aaKnown RBP12.93□□□□□ -0.34
SND1-203ENST00000463020 GK2Q14410 553 aaPredicted RBP12.93□□□□□ -0.34
SND1-203ENST00000463020 PDCD1Q15116 288 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 CFAP77Q6ZQR2 320 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 COLCA1Q6ZS62 124 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 TSEN54Q7Z6J9 526 aaKnown RBP12.93□□□□□ -0.34
SND1-203ENST00000463020 LDLRAD3Q86YD5 345 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 GLB1L2Q8IW92 636 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 RAB2BQ8WUD1 216 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 APOBEC3DQ96AK3 386 aaPredicted RBP12.93□□□□□ -0.34
SND1-203ENST00000463020 HRASLS5Q96KN8 279 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 COG8Q96MW5 612 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 WACQ9BTA9 647 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 NUAK2Q9H093 628 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 TMEM100Q9NV29 134 aa12.93□□□□□ -0.34
SND1-203ENST00000463020 OR10H3O60404 316 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 GGT2P36268 569 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 CD200P41217 278 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 CDKN2AP42771 156 aaKnown RBP12.92□□□□□ -0.34
SND1-203ENST00000463020 RGS6P49758 472 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 BPIFB3P59826 476 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 LSM6P62312 80 aaKnown RBP12.92□□□□□ -0.34
SND1-203ENST00000463020 ARF6P62330 175 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 COX10Q12887 443 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 CNIH3Q8TBE1 160 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 MUL1Q969V5 352 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 VSX1Q9NZR4 365 aaPredicted RBP12.92□□□□□ -0.34
SND1-203ENST00000463020 WARS2Q9UGM6 360 aaKnown RBP12.92□□□□□ -0.34
SND1-203ENST00000463020 COL7A1Q02388 2944 aa12.92□□□□□ -0.34
SND1-203ENST00000463020 H3BMQ9 156 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 J3QW42 95 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 ADAM20O43506 726 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 RGS10O43665 173 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 KHDRBS3O75525 346 aaKnown RBP12.91□□□□□ -0.34
SND1-203ENST00000463020 GYPAP02724 150 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 ACSM4P0C7M7 580 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 FMO3P31513 532 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 EGR3Q06889 387 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 KCNMB1Q16558 191 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 XAF1Q6GPH4 301 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 LAIR2Q6ISS4 152 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 ZNF826PQ6ZT77 177 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 LINC00346Q8IVM7 164 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 OR52J3Q8NH60 311 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 TBC1D15Q8TC07 691 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 RORBQ92753 470 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 MYDGFQ969H8 173 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 FAM46AQ96IP4 442 aaKnown RBP12.91□□□□□ -0.34
SND1-203ENST00000463020 COQ7Q99807 217 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 BCL7BQ9BQE9 202 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 DUSP21Q9H596 190 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 C16orf95Q9H693 158 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 NMNAT1Q9HAN9 279 aaPredicted RBP12.91□□□□□ -0.34
SND1-203ENST00000463020 ATPIF1Q9UII2 106 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 SIGLEC9Q9Y336 463 aa12.91□□□□□ -0.34
SND1-203ENST00000463020 IGHV3OR15-7A0A075B7D8 119 aa12.9□□□□□ -0.34
SND1-203ENST00000463020 ZNF816-ZNF321PA0A0X1KG74 233 aa12.9□□□□□ -0.34
SND1-203ENST00000463020 E9PQ18 207 aa12.9□□□□□ -0.34
SND1-203ENST00000463020 LGALS8O00214 317 aa12.9□□□□□ -0.34
SND1-203ENST00000463020 XKRYO14609 159 aa12.9□□□□□ -0.34
SND1-203ENST00000463020 MPZL2O60487 215 aa12.9□□□□□ -0.34
SND1-203ENST00000463020 PTP4A3O75365 173 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms