RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 RFX4Q33E94 735 aa12.25□□□□□ -0.45
APP-211ENST00000462267 TMPRSS11FQ6ZWK6 438 aa12.25□□□□□ -0.45
APP-211ENST00000462267 LINC00346Q8IVM7 164 aa12.25□□□□□ -0.45
APP-211ENST00000462267 MRPL41Q8IXM3 137 aaKnown RBP12.25□□□□□ -0.45
APP-211ENST00000462267 MKXQ8IYA7 352 aa12.25□□□□□ -0.45
APP-211ENST00000462267 DPP10Q8N608 796 aa12.25□□□□□ -0.45
APP-211ENST00000462267 ANKRD42Q8N9B4 389 aa12.25□□□□□ -0.45
APP-211ENST00000462267 OR4X2Q8NGF9 303 aa12.25□□□□□ -0.45
APP-211ENST00000462267 RAB3IPQ96QF0 476 aaPredicted RBP12.25□□□□□ -0.45
APP-211ENST00000462267 PALMDQ9NP74 551 aa12.25□□□□□ -0.45
APP-211ENST00000462267 NRIP3Q9NQ35 241 aa12.25□□□□□ -0.45
APP-211ENST00000462267 SNTG1Q9NSN8 517 aa12.25□□□□□ -0.45
APP-211ENST00000462267 IGLV1-36A0A0B4J1U3 117 aa12.24□□□□□ -0.45
APP-211ENST00000462267 H0YHG0 523 aa12.24□□□□□ -0.45
APP-211ENST00000462267 SOCS2O14508 198 aa12.24□□□□□ -0.45
APP-211ENST00000462267 CDC42EP2O14613 210 aa12.24□□□□□ -0.45
APP-211ENST00000462267 ACAA1P09110 424 aaPredicted RBP12.24□□□□□ -0.45
APP-211ENST00000462267 GZMMP51124 257 aa12.24□□□□□ -0.45
APP-211ENST00000462267 SPIBQ01892 262 aa12.24□□□□□ -0.45
APP-211ENST00000462267 SLC36A3Q495N2 470 aa12.24□□□□□ -0.45
APP-211ENST00000462267 PLA1AQ53H76 456 aa12.24□□□□□ -0.45
APP-211ENST00000462267 GLYATL3Q5SZD4 288 aa12.24□□□□□ -0.45
APP-211ENST00000462267 PTCHD4Q6ZW05 846 aa12.24□□□□□ -0.45
APP-211ENST00000462267 HUWE1Q7Z6Z7 4374 aaKnown RBP12.24□□□□□ -0.45
APP-211ENST00000462267 FAM185AQ8N0U4 392 aa12.24□□□□□ -0.45
APP-211ENST00000462267 LNX2Q8N448 690 aa12.24□□□□□ -0.45
APP-211ENST00000462267 SLC26A10Q8NG04 563 aa12.24□□□□□ -0.45
APP-211ENST00000462267 OR5K1Q8NHB7 308 aa12.24□□□□□ -0.45
APP-211ENST00000462267 ANGPTL6Q8NI99 470 aa12.24□□□□□ -0.45
APP-211ENST00000462267 FOXRED1Q96CU9 486 aaPredicted RBP12.24□□□□□ -0.45
APP-211ENST00000462267 TSSK2Q96PF2 358 aa12.24□□□□□ -0.45
APP-211ENST00000462267 LYSTQ99698 3801 aa12.24□□□□□ -0.45
APP-211ENST00000462267 ASCL2Q99929 193 aa12.24□□□□□ -0.45
APP-211ENST00000462267 TLNRD1Q9H1K6 362 aa12.24□□□□□ -0.45
APP-211ENST00000462267 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.24□□□□□ -0.45
APP-211ENST00000462267 CYB5R1Q9UHQ9 305 aa12.24□□□□□ -0.45
APP-211ENST00000462267 A0A1W2PPH5 198 aa12.23□□□□□ -0.45
APP-211ENST00000462267 DCTN6O00399 190 aa12.23□□□□□ -0.45
APP-211ENST00000462267 CDIPTO14735 213 aa12.23□□□□□ -0.45
APP-211ENST00000462267 NDUFB2O95178 105 aa12.23□□□□□ -0.45
APP-211ENST00000462267 CDKN2AP42771 156 aaKnown RBP12.23□□□□□ -0.45
APP-211ENST00000462267 GPR4P46093 362 aa12.23□□□□□ -0.45
APP-211ENST00000462267 TRAM2Q15035 370 aa12.23□□□□□ -0.45
APP-211ENST00000462267 TNFAIP8L3Q5GJ75 292 aa12.23□□□□□ -0.45
APP-211ENST00000462267 PIGWQ7Z7B1 504 aa12.23□□□□□ -0.45
APP-211ENST00000462267 LHFPL4Q7Z7J7 247 aa12.23□□□□□ -0.45
APP-211ENST00000462267 OFCC1Q8IZS5 231 aa12.23□□□□□ -0.45
APP-211ENST00000462267 DYNAPQ8N1N2 210 aa12.23□□□□□ -0.45
APP-211ENST00000462267 CYB561A3Q8NBI2 242 aa12.23□□□□□ -0.45
APP-211ENST00000462267 OR51D1Q8NGF3 324 aa12.23□□□□□ -0.45
APP-211ENST00000462267 OR10Z1Q8NGY1 313 aa12.23□□□□□ -0.45
APP-211ENST00000462267 LZICQ8WZA0 190 aa12.23□□□□□ -0.45
APP-211ENST00000462267 TFAP2CQ92754 450 aa12.23□□□□□ -0.45
APP-211ENST00000462267 GPX7Q96SL4 187 aaPredicted RBP12.23□□□□□ -0.45
APP-211ENST00000462267 WDR13Q9H1Z4 485 aa12.23□□□□□ -0.45
APP-211ENST00000462267 B9D1Q9UPM9 204 aa12.23□□□□□ -0.45
APP-211ENST00000462267 LRP12Q9Y561 859 aa12.23□□□□□ -0.45
APP-211ENST00000462267 hCG_1809904A0A1W2PP81 198 aa12.22□□□□□ -0.45
APP-211ENST00000462267 A0A1W2PPE2 198 aa12.22□□□□□ -0.45
APP-211ENST00000462267 A0A1W2PR64 198 aa12.22□□□□□ -0.45
APP-211ENST00000462267 A0A1W2PRV1 198 aa12.22□□□□□ -0.45
APP-211ENST00000462267 RHBDL1O75783 438 aa12.22□□□□□ -0.45
APP-211ENST00000462267 DYNLT3P51808 116 aa12.22□□□□□ -0.45
APP-211ENST00000462267 GMFBP60983 142 aa12.22□□□□□ -0.45
APP-211ENST00000462267 MXRA7P84157 204 aa12.22□□□□□ -0.45
APP-211ENST00000462267 NFYCQ13952 458 aa12.22□□□□□ -0.45
APP-211ENST00000462267 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
APP-211ENST00000462267 DRAM2Q6UX65 266 aa12.22□□□□□ -0.45
APP-211ENST00000462267 ZNF730Q6ZMV8 503 aa12.22□□□□□ -0.45
APP-211ENST00000462267 MBOAT2Q6ZWT7 520 aa12.22□□□□□ -0.45
APP-211ENST00000462267 MEPCEQ7L2J0 689 aaKnown RBP12.22□□□□□ -0.45
APP-211ENST00000462267 CPLX4Q7Z7G2 160 aa12.22□□□□□ -0.45
APP-211ENST00000462267 MALSU1Q96EH3 234 aa12.22□□□□□ -0.45
APP-211ENST00000462267 CCDC28BQ9BUN5 200 aa12.22□□□□□ -0.45
APP-211ENST00000462267 FNDC11Q9BVV2 318 aa12.22□□□□□ -0.45
APP-211ENST00000462267 ELL3Q9HB65 397 aaPredicted RBP12.22□□□□□ -0.45
APP-211ENST00000462267 IER3IP1Q9Y5U9 82 aa12.22□□□□□ -0.45
APP-211ENST00000462267 A0A087WUU8 490 aa12.21□□□□□ -0.45
APP-211ENST00000462267 H3BUI4 141 aa12.21□□□□□ -0.45
APP-211ENST00000462267 PTP4A3O75365 173 aa12.21□□□□□ -0.45
APP-211ENST00000462267 TXNDC12O95881 172 aa12.21□□□□□ -0.45
APP-211ENST00000462267 ANOS1P23352 680 aa12.21□□□□□ -0.45
APP-211ENST00000462267 COX7A1P24310 79 aa12.21□□□□□ -0.45
APP-211ENST00000462267 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
APP-211ENST00000462267 SLC18A1P54219 525 aa12.21□□□□□ -0.45
APP-211ENST00000462267 IL5RAQ01344 420 aa12.21□□□□□ -0.45
APP-211ENST00000462267 ETV3LQ6ZN32 361 aa12.21□□□□□ -0.45
APP-211ENST00000462267 OR6V1Q8N148 313 aa12.21□□□□□ -0.45
APP-211ENST00000462267 C11orf42Q8N5U0 333 aa12.21□□□□□ -0.45
APP-211ENST00000462267 SPSB4Q96A44 273 aa12.21□□□□□ -0.45
APP-211ENST00000462267 RABEP2Q9H5N1 569 aa12.21□□□□□ -0.45
APP-211ENST00000462267 SRA1Q9HD15 236 aaKnown RBP12.21□□□□□ -0.45
APP-211ENST00000462267 RHCGQ9UBD6 479 aa12.21□□□□□ -0.45
APP-211ENST00000462267 TBL2Q9Y4P3 447 aaKnown RBP12.21□□□□□ -0.45
APP-211ENST00000462267 ANGPT2O15123 496 aa12.2□□□□□ -0.46
APP-211ENST00000462267 XRCC2O43543 280 aa12.2□□□□□ -0.46
APP-211ENST00000462267 TFF1P04155 84 aa12.2□□□□□ -0.46
APP-211ENST00000462267 AZGP1P25311 298 aaKnown RBP12.2□□□□□ -0.46
APP-211ENST00000462267 CHATP28329 748 aa12.2□□□□□ -0.46
APP-211ENST00000462267 GNALP38405 381 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms