RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 SHISA3A0PJX4 238 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 CD300LBA8K4G0 201 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 SERPINA3P01011 423 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 CFL1P23528 166 aaKnown RBP11.55□□□□□ -0.56
PBRM1-219ENST00000462207 COL8A1P27658 744 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 CTF1Q16619 201 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 ZNF718Q3SXZ3 478 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 CENPSQ8N2Z9 138 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 RAB2BQ8WUD1 216 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 GTF3AQ92664 365 aaKnown RBP11.55□□□□□ -0.56
PBRM1-219ENST00000462207 DVL3Q92997 716 aaPredicted RBP11.55□□□□□ -0.56
PBRM1-219ENST00000462207 MRPL37Q9BZE1 423 aaKnown RBP11.55□□□□□ -0.56
PBRM1-219ENST00000462207 OPA3Q9H6K4 179 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 TAS2R4Q9NYW5 299 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 DUSP13Q9UII6 198 aa11.55□□□□□ -0.56
PBRM1-219ENST00000462207 TRAV8-7A0A075B6U6 113 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 LOC390937A0A1W2PQ73 354 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 A6NNC1 897 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 RAC2P15153 192 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 ZNF20P17024 532 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 MAP2K3P46734 347 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 VBP1P61758 197 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 RPS23P62266 143 aaKnown RBP11.54□□□□□ -0.56
PBRM1-219ENST00000462207 ADIPOQQ15848 244 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 TIMM50Q3ZCQ8 353 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 MBNL2Q5VZF2 373 aaKnown RBP11.54□□□□□ -0.56
PBRM1-219ENST00000462207 HAVCR1Q96D42 359 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 SPOCK3Q9BQ16 436 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 PURGQ9UJV8 347 aaKnown RBP11.54□□□□□ -0.56
PBRM1-219ENST00000462207 RHBDD3Q9Y3P4 386 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 SMIM30A4D0T7 59 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 MTRF1O75570 445 aaKnown RBP11.54□□□□□ -0.56
PBRM1-219ENST00000462207 GATBO75879 557 aaKnown RBP11.54□□□□□ -0.56
PBRM1-219ENST00000462207 UCHL1P09936 223 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 ZNF250P15622 560 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 GCH1P30793 250 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 GNALP38405 381 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 RIPPLY1Q0D2K3 151 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 DAZAP2Q15038 168 aaPredicted RBP11.54□□□□□ -0.56
PBRM1-219ENST00000462207 ZNF672Q499Z4 452 aaPredicted RBP11.54□□□□□ -0.56
PBRM1-219ENST00000462207 LINC00299Q6ZSB3 139 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 OR51A2Q8NGJ7 313 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 SYNPRQ8TBG9 265 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 ZNF442Q9H7R0 627 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 GPR160Q9UJ42 338 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 CMAHPQ9Y471 501 aa11.54□□□□□ -0.56
PBRM1-219ENST00000462207 HELZ2Q9BYK8 2649 aaKnown RBP11.54□□□□□ -0.56
PBRM1-219ENST00000462207 A0A1W2PPW3 197 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 TIMM8AO60220 97 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-219ENST00000462207 CD2P06729 351 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 OR4A8P0C604 315 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 FGF9P31371 208 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-219ENST00000462207 HSD17B12Q53GQ0 312 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 SP5Q6BEB4 398 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-219ENST00000462207 PARP16Q8N5Y8 322 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 NDNFQ8TB73 568 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 NPRL2Q8WTW4 380 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 MRPL24Q96A35 216 aaKnown RBP11.53□□□□□ -0.56
PBRM1-219ENST00000462207 NKX3-1Q99801 234 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-219ENST00000462207 PAPOLGQ9BWT3 736 aaKnown RBP11.53□□□□□ -0.56
PBRM1-219ENST00000462207 GPR173Q9NS66 373 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 KCNN3Q9UGI6 736 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 COL12A1Q99715 3063 aa11.53□□□□□ -0.56
PBRM1-219ENST00000462207 SPTAN1Q13813 2472 aaKnown RBP11.53□□□□□ -0.56
PBRM1-219ENST00000462207 PLCE1Q9P212 2302 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 ZNF816-ZNF321PA0A0X1KG74 233 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 IQCF6A8MYZ5 107 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 CLPXO76031 633 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 KITLGP21583 273 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 GALP22466 123 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 TUBG1P23258 451 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 MAPK3P27361 379 aaPredicted RBP11.52□□□□□ -0.56
PBRM1-219ENST00000462207 KLF3P57682 345 aaPredicted RBP11.52□□□□□ -0.56
PBRM1-219ENST00000462207 UBASH3BQ8TF42 649 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 PIGCQ92535 297 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 TUBG2Q9NRH3 451 aa11.52□□□□□ -0.56
PBRM1-219ENST00000462207 CISD1Q9NZ45 108 aaKnown RBP11.52□□□□□ -0.56
PBRM1-219ENST00000462207 UTP20O75691 2785 aaKnown RBP11.52□□□□□ -0.57
PBRM1-219ENST00000462207 IGLV3-9A0A075B6K5 115 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 DHRS7CA6NNS2 312 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 ZNF850A8MQ14 1090 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 CLEC2LP0C7M8 214 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 COX6B1P14854 86 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 IGFBP3P17936 291 aaPredicted RBP11.52□□□□□ -0.57
PBRM1-219ENST00000462207 ADRA2CP18825 462 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 FSTP19883 344 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 CA6P23280 308 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 ZNF846Q147U1 533 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 SPCS2Q15005 226 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 UBE2V2Q15819 145 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 CEP78Q5JTW2 689 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 Q6ZR03 302 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 C1orf174Q8IYL3 243 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 CCDC54Q8NEL0 328 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 SLC30A2Q9BRI3 323 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 WDR12Q9GZL7 423 aaKnown RBP11.52□□□□□ -0.57
PBRM1-219ENST00000462207 CHST5Q9GZS9 411 aa11.52□□□□□ -0.57
PBRM1-219ENST00000462207 FGF23Q9GZV9 251 aaPredicted RBP11.52□□□□□ -0.57
PBRM1-219ENST00000462207 TMEM165Q9HC07 324 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms