RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 MPDZO75970 2070 aa12.89□□□□□ -0.35
NCL-207ENST00000461347 UMAD1C9J7I0 102 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 HSPB6O14558 160 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 NXPH3O95157 252 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 OR5H8P0DN80 308 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 VSIG8P0DPA2 414 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 OPN5Q6U736 354 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 OR13C8Q8NGS7 320 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 TIMP4Q99727 224 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 ALKBH4Q9NXW9 302 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 SCRG1O75711 98 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 BGLAPP02818 100 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 GUSBP08236 651 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 RNF4P78317 190 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 HMGN3Q15651 99 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 TMEM182Q6ZP80 229 aaPredicted RBP12.88□□□□□ -0.35
NCL-207ENST00000461347 GJC3Q8NFK1 279 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 OR1N1Q8NGS0 311 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 OR14L1PQ8NHC6 308 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 PTPMT1Q8WUK0 201 aaPredicted RBP12.88□□□□□ -0.35
NCL-207ENST00000461347 KCNS2Q9ULS6 477 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 SNRNP200O75643 2136 aaKnown RBP12.88□□□□□ -0.35
NCL-207ENST00000461347 ABCD4O14678 606 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 ANGPTL7O43827 346 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 SFT2D2O95562 160 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 CNOT4O95628 575 aaKnown RBP12.88□□□□□ -0.35
NCL-207ENST00000461347 KCNJ3P48549 501 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 FOXL2P58012 376 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 CNN3Q15417 329 aaKnown RBP12.88□□□□□ -0.35
NCL-207ENST00000461347 PLCXD3Q63HM9 321 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 CLEC18BQ6UXF7 455 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 MOB3CQ70IA8 216 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 SLC30A7Q8NEW0 376 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 FAM86C1Q9NVL1 165 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.88□□□□□ -0.35
NCL-207ENST00000461347 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.88□□□□□ -0.35
NCL-207ENST00000461347 A8MXK9 166 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 CD37P11049 281 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 HTR5AP47898 357 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 NKX6-1P78426 367 aaPredicted RBP12.88□□□□□ -0.35
NCL-207ENST00000461347 NKAIN1Q4KMZ8 207 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 KIRREL1Q96J84 757 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 OR6C1Q96RD1 312 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 FOXQ1Q9C009 403 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 MOB1AQ9H8S9 216 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 LRFN1Q9P244 771 aa12.88□□□□□ -0.35
NCL-207ENST00000461347 ST8SIA3O43173 380 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 GRB2P62993 217 aaKnown RBP12.87□□□□□ -0.35
NCL-207ENST00000461347 PRSS54Q6PEW0 395 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 DEGS2Q6QHC5 323 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 WDSUB1Q8N9V3 476 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 SLC38A9Q8NBW4 561 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 GLYATL2Q8WU03 294 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 ADAT3Q96EY9 351 aaPredicted RBP12.87□□□□□ -0.35
NCL-207ENST00000461347 PIK3IP1Q96FE7 263 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 MBTPS2O43462 519 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 ICAM2P13598 275 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 MPGP29372 298 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 EFNA3P52797 238 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 HNF4GQ14541 408 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 SHHQ15465 462 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 PRR18Q8N4B5 295 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 ARHGEF39Q8N4T4 335 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 OR5AP2Q8NGF4 316 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 MCHR2Q969V1 340 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 RAB18Q9NP72 206 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 JMJD7P0C870 316 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 FPR2P25090 351 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 PIGPP57054 158 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 EGR4Q05215 589 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 MYBPHQ13203 477 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 KIAA0141Q14154 515 aaPredicted RBP12.87□□□□□ -0.35
NCL-207ENST00000461347 ZNF345Q14585 488 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 NR0B2Q15466 257 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 MICBQ29980 383 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 JMJD6Q6NYC1 403 aaPredicted RBP12.87□□□□□ -0.35
NCL-207ENST00000461347 OR5T1Q8NG75 326 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 MVB12AQ96EY5 273 aa12.87□□□□□ -0.35
NCL-207ENST00000461347 CRYBA1P05813 215 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 SERPINE2P07093 398 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 NFYBP25208 207 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 NDUFA6P56556 154 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 FZD5Q13467 585 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 C9orf135Q5VTT2 229 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 BEND4Q6ZU67 534 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 SLC16A13Q7RTY0 426 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 LGI3Q8N145 548 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 SGCZQ96LD1 299 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 MED9Q9NWA0 146 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 MRPL22Q9NWU5 206 aaKnown RBP12.86□□□□□ -0.35
NCL-207ENST00000461347 KCNK7Q9Y2U2 307 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
NCL-207ENST00000461347 SLC35A1P78382 337 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 CMTM1Q8IZ96 169 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 RTN4IP1Q8WWV3 396 aaPredicted RBP12.86□□□□□ -0.35
NCL-207ENST00000461347 ROBO4Q8WZ75 1007 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 TXNDC12O95881 172 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms