RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 MCRIP1C9JLW8 97 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 ERVH48-1M5A8F1 160 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 YKT6O15498 198 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 ABHD16AO95870 558 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 TXNDC12O95881 172 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 RAB2AP61019 212 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 PPP1R1AQ13522 171 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 UNQ9370/PRO34162Q6UXP9 181 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 OR2AE1Q8NHA4 323 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 ARHGAP5-AS1Q96IT6 56 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 KLHDC3Q9BQ90 382 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF768Q9H5H4 540 aaKnown RBP10.34□□□□□ -0.75
NPHP4-204ENST00000460696 TANC1Q9C0D5 1861 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 CACNA1DQ01668 2161 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 PLXNA2O75051 1894 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 ANKRD11Q6UB99 2663 aaPredicted RBP10.34□□□□□ -0.75
NPHP4-204ENST00000460696 A0A1B0GTQ1 180 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 KRBOX1C9JBD0 128 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 OR8U9P0C7N5 309 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 OR3A4PP47883 348 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 WIPI1Q5MNZ9 446 aaPredicted RBP10.34□□□□□ -0.75
NPHP4-204ENST00000460696 CPT1CQ8TCG5 803 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 ARPC5LQ9BPX5 153 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 MESP1Q9BRJ9 268 aa10.34□□□□□ -0.75
NPHP4-204ENST00000460696 TTLL8A6PVC2 850 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 PRR32B1ATL7 298 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 E9PQ18 207 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF44P15621 663 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF250P15622 560 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 M6PRP20645 277 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 FKBP2P26885 142 aaKnown RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 PSMB6P28072 239 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 HLXQ14774 488 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 PDCD1Q15116 288 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 SHBQ15464 509 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 AANATQ16613 207 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 LYG2Q86SG7 212 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 LRRTM1Q86UE6 522 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 CLEC1AQ8NC01 280 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 TMED6Q8WW62 240 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 OIT3Q8WWZ8 545 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 SGCZQ96LD1 299 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 TWSG1Q9GZX9 223 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 SLC17A5Q9NRA2 495 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 IGHV5-10-1A0A0J9YXX1 117 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 PRR19A6NJB7 356 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 J3QRE1 110 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 K7EPK0 472 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 CNOT4O95628 575 aaKnown RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 CELA2AP08217 269 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 IFI6P09912 130 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 NME2P22392 152 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 CAMLGP49069 296 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 PLA2G7Q13093 441 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 CLLU1Q5K131 121 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF684Q5T5D7 378 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 LPCAT3Q6P1A2 487 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 LINC00114Q6XXX2 140 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 MKXQ8IYA7 352 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 FAM71E2Q8N5Q1 922 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ADAT3Q96EY9 351 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 UTP23Q9BRU9 249 aaKnown RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF2Q9BSG1 426 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 CRLF2Q9HC73 371 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 LRFN1Q9P244 771 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 TRBV5-5A0A0J9YX44 114 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 SPRY1O43609 319 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF354AO60765 605 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 EPHA1P21709 976 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 KISS1Q15726 138 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF695Q8IW36 515 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 SPICQ8N5J4 248 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 OR8B12Q8NGG6 310 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 TERB2Q8NHR7 220 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 SECTM1Q8WVN6 248 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 C5orf42Q9H799 3197 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 IGLV1-36A0A0B4J1U3 117 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 OR2M5A3KFT3 312 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 CBR3O75828 277 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 TIAF1O95411 115 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 TSPAN15O95858 294 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 RBP2P50120 134 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 SCAND1P57086 179 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ACOT7LQ6ZUV0 252 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 PRSS42Q7Z5A4 293 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 CNTNAP3BQ96NU0 1288 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF649Q9BS31 505 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF286AQ9HBT8 521 aa10.33□□□□□ -0.76
NPHP4-204ENST00000460696 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 ELF5Q9UKW6 265 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-204ENST00000460696 COL4A4P53420 1690 aaPredicted RBP10.32□□□□□ -0.76
NPHP4-204ENST00000460696 IGHV3-64DA0A0J9YX35 117 aa10.32□□□□□ -0.76
NPHP4-204ENST00000460696 B8ZZF3 427 aa10.32□□□□□ -0.76
NPHP4-204ENST00000460696 MED6O75586 246 aa10.32□□□□□ -0.76
NPHP4-204ENST00000460696 OMGP23515 440 aa10.32□□□□□ -0.76
NPHP4-204ENST00000460696 UBE2NP61088 152 aaKnown RBP10.32□□□□□ -0.76
NPHP4-204ENST00000460696 ARG2P78540 354 aa10.32□□□□□ -0.76
NPHP4-204ENST00000460696 FOXK1P85037 733 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms